Jfortin1/crisprBwa: BWA-based alignment of CRISPR gRNA spacer sequences

Provides a user-friendly interface to map on-targets and off-targets of CRISPR gRNA spacer sequences using bwa. The alignment is fast, and can be performed using either commonly-used or custom CRISPR nucleases. The alignment can work with any reference or custom genomes. Currently not supported on Windows machines.

Getting started

Package details

Bioconductor views Alignment CRISPR FunctionalGenomics
Maintainer
LicenseMIT + file LICENSE
Version1.1.2
URL https://github.com/Jfortin1/crisprBwa
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Jfortin1/crisprBwa")
Jfortin1/crisprBwa documentation built on May 13, 2022, 4:53 p.m.