LTLA/InteractionSet: Base Classes for Storing Genomic Interaction Data

Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.

Getting started

Package details

Bioconductor views DataRepresentation HiC Infrastructure Software
Maintainer
LicenseGPL-3
Version1.11.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("LTLA/InteractionSet")
LTLA/InteractionSet documentation built on Oct. 31, 2018, 10:19 a.m.