LTLA/SingleR: Reference-Based Single-Cell RNA-Seq Annotation

Performs unbiased cell type recognition from single-cell RNA sequencing data, by leveraging reference transcriptomic datasets of pure cell types to infer the cell of origin of each single cell independently.

Getting started

Package details

Bioconductor views Annotation Classification Clustering GeneExpression SingleCell Software Transcriptomics
Maintainer
LicenseGPL-3 + file LICENSE
Version1.7.1
URL https://github.com/LTLA/SingleR
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("LTLA/SingleR")
LTLA/SingleR documentation built on May 25, 2021, 11:06 a.m.