Files in LTLA/kmknn

Nearest Neighbor Detection for Bioconductor Packages

.Rbuildignore

.github/workflows/check.yaml

.github/workflows/transplant.yaml

.gitignore

DESCRIPTION

Dockerfile

NAMESPACE

R/AllClasses.R R/AllGenerics.R R/AnnoyIndex-class.R R/AnnoyParam-class.R R/BiocNeighborIndex-class.R R/BiocNeighborParam-class.R R/ExhaustiveIndex-class.R R/ExhaustiveParam-class.R R/HnswIndex-class.R R/HnswParam-class.R R/KmknnIndex-class.R R/KmknnParam-class.R R/RcppExports.R R/VptreeIndex-class.R R/VptreeParam-class.R R/buildAnnoy.R R/buildExhaustive.R R/buildHnsw.R R/buildIndex.R R/buildKmknn.R R/buildVptree.R R/findKNN-functions.R R/findKNN-methods.R R/findMutualNN.R R/findNeighbors-functions.R R/findNeighbors-methods.R R/package.R R/queryKNN-functions.R R/queryKNN-methods.R R/queryNeighbors-functions.R R/queryNeighbors-methods.R R/template_find_knn.R R/template_query_knn.R R/template_range_find_exact.R R/template_range_query_exact.R R/utils.R

inst/NEWS.Rd

inst/include/aarand/aarand.hpp

inst/include/annoy/annoylib.h

inst/include/annoy/kissrandom.h

inst/include/annoy/mman.h

inst/include/hnswlib/bruteforce.h

inst/include/hnswlib/hnswalg.h

inst/include/hnswlib/hnswlib.h

inst/include/hnswlib/space_ip.h

inst/include/hnswlib/space_l2.h

inst/include/hnswlib/visited_list_pool.h

inst/include/kmeans/Base.hpp

inst/include/kmeans/Details.hpp

inst/include/kmeans/HartiganWong.hpp

inst/include/kmeans/InitializeKmeansPP.hpp

inst/include/kmeans/InitializeNone.hpp

inst/include/kmeans/InitializePCAPartition.hpp

inst/include/kmeans/InitializeRandom.hpp

inst/include/kmeans/Kmeans.hpp

inst/include/kmeans/Lloyd.hpp

inst/include/kmeans/MiniBatch.hpp

inst/include/kmeans/QuickSearch.hpp

inst/include/kmeans/compute_centroids.hpp

inst/include/kmeans/compute_wcss.hpp

inst/include/kmeans/is_edge_case.hpp

inst/include/kmeans/random.hpp

inst/include/knncolle/Annoy/Annoy.hpp

inst/include/knncolle/BruteForce/BruteForce.hpp

inst/include/knncolle/Hnsw/Hnsw.hpp

inst/include/knncolle/Kmknn/Kmknn.hpp

inst/include/knncolle/VpTree/VpTree.hpp

inst/include/knncolle/knncolle.hpp

inst/include/knncolle/utils/Base.hpp

inst/include/knncolle/utils/NeighborQueue.hpp

inst/include/knncolle/utils/distances.hpp

inst/include/knncolle/utils/find_nearest_neighbors.hpp

inst/include/powerit/PowerIterations.hpp

inst/include/source.sh

inst/transplant.R man/AnnoyIndex.Rd man/AnnoyParam.Rd man/BiocNeighborIndex.Rd man/BiocNeighborParam.Rd man/BiocNeighbors-algorithms.Rd man/BiocNeighbors-package.Rd man/BiocNeighbors-raw-index.Rd man/BiocNeighbors-ties.Rd man/ExhaustiveIndex.Rd man/ExhaustiveParam.Rd man/HnswIndex.Rd man/HnswParam.Rd man/KmknnIndex.Rd man/KmknnParam.Rd man/VptreeIndex.Rd man/VptreeParam.Rd man/buildAnnoy.Rd man/buildExhaustive.Rd man/buildHnsw.Rd man/buildIndex.Rd man/buildKmknn.Rd man/buildVptree.Rd man/findKNN-functions.Rd man/findKNN-methods.Rd man/findMutualNN.Rd man/findNeighbors-functions.Rd man/findNeighbors-methods.Rd man/queryKNN-functions.Rd man/queryKNN-methods.Rd man/queryNeighbors-functions.Rd man/queryNeighbors-methods.Rd

src/Makevars

src/RcppExports.cpp

src/annoy.cpp

src/annoy.h

src/annoy/RcppAnnoy.h

src/annoy/annoylib.h

src/annoy/kissrandom.h

src/annoy/mman.h

src/build_annoy.cpp

src/build_hnsw.cpp

src/build_vptree.cpp

src/distances.cpp

src/distances.h

src/exhaustive.cpp

src/exhaustive.h

src/find_annoy.cpp

src/find_exhaustive.cpp

src/find_hnsw.cpp

src/find_kmknn.cpp

src/find_knn.h

src/find_mutual_nns.cpp

src/find_vptree.cpp

src/hnsw.cpp

src/hnsw.h

src/kmknn.cpp

src/kmknn.h

src/neighbor_queue.h

src/query_annoy.cpp

src/query_exhaustive.cpp

src/query_hnsw.cpp

src/query_kmknn.cpp

src/query_knn.h

src/query_vptree.cpp

src/range_find.h

src/range_query.h

src/utils.cpp

src/utils.h

src/vptree.cpp

src/vptree.h

tests/testthat.R tests/testthat/setup.R tests/testthat/test-build-annoy.R tests/testthat/test-build-exhaustive.R tests/testthat/test-build-hnsw.R tests/testthat/test-build-kmknn.R tests/testthat/test-build-vptree.R tests/testthat/test-find-annoy.R tests/testthat/test-find-exhaustive.R tests/testthat/test-find-hnsw.R tests/testthat/test-find-kmknn.R tests/testthat/test-find-mnn.R tests/testthat/test-find-vptree.R tests/testthat/test-methods.R tests/testthat/test-query-annoy.R tests/testthat/test-query-exhaustive.R tests/testthat/test-query-hnsw.R tests/testthat/test-query-kmknn.R tests/testthat/test-query-vptree.R tests/testthat/test-range-find-kmknn.R tests/testthat/test-range-find-vptree.R tests/testthat/test-range-query-exhaustive.R tests/testthat/test-range-query-kmknn.R tests/testthat/test-range-query-vptree.R tests/testthat/test-ties.R tests/testthat/test-utils.R vignettes/approx.Rmd vignettes/exact.Rmd vignettes/range.Rmd

vignettes/ref.bib

LTLA/kmknn documentation built on Feb. 5, 2024, 6:03 p.m.