mapBasePlot: Base ggplot from assay data

Description Usage Arguments Details Value See Also

Description

Function for a default base ggplot that can be used to dplyr::map nested data to some default plots. The base plot can be appended with ggplot::geom_point for example to create a scatterplot.

Usage

1
2
3
mapBasePlot(df, title, subtitle = NULL, plotCols = list(x = "RelTime", y =
  "Value", color = "RelTime", fill = NULL, group = NULL, facet1 = "AbsTime",
  facet2 = "Condition"))

Arguments

df

A data.frame with values to plot

title

Title of the plot

plotCols

A named list of plot settings

Details

The plotCols list must be named with at least

x

Column name of values on the X-axis

y

Column name of values on the y-axis

color

Column name of values to color by

Optionally, you can also add facets,

facet1

Column name of vertical facets

facet2

Column name of horizontal facets

Value

A ggplot object without any geom

See Also

Other PhenoDb Plotting: mapBoxPlot, mapLinePlot, mapScatterPlot, trelliBasePlot


Lodewic/accomodation-recommendation documentation built on Oct. 27, 2018, 12:12 a.m.