API for MadsAlbertsen/ampvis2
Tools for visualising amplicon data
| Global functions | |
|---|---|
| %>% | Man page |
| .onAttach | Man page Source code |
| AalborgWWTPs | Man page |
| MiDAS | Man page |
| abundAreCounts | Man page |
| aggregate_abund | Man page Source code |
| amp_alpha_diversity | Man page |
| amp_alphadiv | Man page Source code |
| amp_boxplot | Man page Source code |
| amp_core | Man page Source code |
| amp_export_fasta | Man page Source code |
| amp_export_long | Man page Source code |
| amp_export_otutable | Man page Source code |
| amp_filter_samples | Man page Source code |
| amp_filter_taxa | Man page Source code |
| amp_frequency | Man page Source code |
| amp_heatmap | Man page Source code |
| amp_import_biom | Man page Source code |
| amp_import_usearch | Man page Source code |
| amp_load | Man page Source code |
| amp_merge_ampvis2 | Man page Source code |
| amp_merge_replicates | Man page Source code |
| amp_mergereplicates | Man page |
| amp_octave | Man page Source code |
| amp_ordinate | Man page Source code |
| amp_otu_network | Man page Source code |
| amp_rank_abundance | Man page |
| amp_rankabundance | Man page Source code |
| amp_rarecurve | Man page Source code |
| amp_rarefaction_curve | Man page |
| amp_rarefy | Man page Source code |
| amp_rename | Man page Source code |
| amp_subset_samples | Man page |
| amp_subset_taxa | Man page |
| amp_time_series | Man page |
| amp_timeseries | Man page Source code |
| amp_venn | Man page Source code |
| ampvis2 | Man page |
| as.data.table.DNAbin | Man page |
| checkReqPkg | Man page |
| dist.JSD | Man page Source code |
| dist.unifrac | Man page Source code |
| example_metadata | Man page |
| example_otutable | Man page |
| example_taxonomy | Man page |
| extractFunctions | Man page Source code |
| filter_otus | Man page |
| filter_species | Man page |
| findOTUcol | Man page Source code |
| getLowestTaxLvl | Man page Source code |
| getMiDASFGData | Man page Source code |
| import | Man page Source code |
| is_ampvis2 | Man page |
| matchOTUs | Man page |
| midasfunctions | Man page |
| normaliseTo100 | Man page |
| parseTaxonomy | Man page Source code |
| print.ampvis2 | Man page Source code |
| print.coreplot | Man page Source code |
| print.figcaption | Man page Source code |
| print.hmfunplot | Man page Source code |
| tax_levels | Man page |
| unzip_file | Man page |
