Files in MadsAlbertsen/ampvis2
Tools for visualising amplicon data

.Rbuildignore
.gitattributes
.gitignore
.travis.yml
DESCRIPTION
ISSUE_TEMPLATE.md
LICENSE
NAMESPACE
R/amp_alphadiv.R R/amp_boxplot.R R/amp_core.R R/amp_export_fasta.R R/amp_export_otutable.R R/amp_frequency.R R/amp_heatmap.R R/amp_import_biom.R R/amp_import_usearch.R R/amp_load.R R/amp_ordinate.R R/amp_otu_network.R R/amp_rankabundance.R R/amp_rarecurve.R R/amp_subset_samples.R R/amp_subset_taxa.R R/amp_timeseries.R R/amp_venn.R R/ampvis2.R R/data.R R/internals.R R/print_methods.R R/zzz.R README.Rmd README.md
_pkgdown.yml
data/AalborgWWTPs.rda
data/MiDAS.rda
data/MiF.rda
data/example_metadata.rda
data/example_otutable.rda
docs/CNAME
docs/ISSUE_TEMPLATE.html
docs/LICENSE-text.html
docs/articles/ampvis2.html
docs/articles/ampvis2_files/figure-html/unnamed-chunk-10-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-11-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-12-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-13-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-14-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-15-1.png
docs/articles/ampvis2_files/figure-html/unnamed-chunk-9-1.png
docs/articles/faq.html
docs/articles/index.html
docs/articles/workflow.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/docsearch.json
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/AalborgWWTPs.html
docs/reference/MiDAS.html
docs/reference/MiF.html
docs/reference/amp_alphadiv.html
docs/reference/amp_boxplot-1.png
docs/reference/amp_boxplot.html
docs/reference/amp_cleanMiF.html
docs/reference/amp_core-1.png
docs/reference/amp_core.html
docs/reference/amp_export_fasta.html
docs/reference/amp_export_otutable.html
docs/reference/amp_frequency-1.png
docs/reference/amp_frequency.html
docs/reference/amp_heatmap-1.png
docs/reference/amp_heatmap-2.png
docs/reference/amp_heatmap-3.png
docs/reference/amp_heatmap.html
docs/reference/amp_import_biom.html
docs/reference/amp_import_usearch.html
docs/reference/amp_load.html
docs/reference/amp_ordinate-1.png
docs/reference/amp_ordinate.html
docs/reference/amp_otu_network-1.png
docs/reference/amp_otu_network.html
docs/reference/amp_rankabundance-1.png
docs/reference/amp_rankabundance.html
docs/reference/amp_rarecurve-1.png
docs/reference/amp_rarecurve.html
docs/reference/amp_rarefy.html
docs/reference/amp_rename.html
docs/reference/amp_subset_samples.html
docs/reference/amp_subset_taxa-1.png
docs/reference/amp_subset_taxa-2.png
docs/reference/amp_subset_taxa-3.png
docs/reference/amp_subset_taxa.html
docs/reference/amp_timeseries-1.png
docs/reference/amp_timeseries-2.png
docs/reference/amp_timeseries.html
docs/reference/amp_venn-1.png
docs/reference/amp_venn.html
docs/reference/ampvis2.html
docs/reference/example_metadata.html
docs/reference/example_otutable.html
docs/reference/index.html
docs/reference/print.ampvis2.html
docs/reference/print.figcaption.html
docs/reference/print.hmfunplot.html
docs/reference/unifrac.html
docs/sitemap.xml
inst/CITATION
man/AalborgWWTPs.Rd man/MiDAS.Rd man/MiF.Rd man/amp_alphadiv.Rd man/amp_boxplot.Rd man/amp_cleanMiF.Rd man/amp_core.Rd man/amp_export_fasta.Rd man/amp_export_otutable.Rd man/amp_frequency.Rd man/amp_heatmap.Rd man/amp_import_biom.Rd man/amp_import_usearch.Rd man/amp_load.Rd man/amp_ordinate.Rd man/amp_otu_network.Rd man/amp_rankabundance.Rd man/amp_rarecurve.Rd man/amp_rarefy.Rd man/amp_rename.Rd man/amp_subset_samples.Rd man/amp_subset_taxa.Rd man/amp_timeseries.Rd man/amp_venn.Rd man/ampvis2.Rd man/example_metadata.Rd man/example_otutable.Rd man/print.ampvis2.Rd man/print.figcaption.Rd man/print.hmfunplot.Rd man/unifrac.Rd vignettes/ampvis2.Rmd
vignettes/example_metadata.csv
vignettes/example_otutable.csv
vignettes/faq.Rmd
vignettes/workflow.png
MadsAlbertsen/ampvis2 documentation built on Oct. 17, 2018, 2:29 a.m.