MathieuEmily/GeneGeneInteR: Tools for Testing Gene-Gene Interaction at the Gene Level

The aim of this package is to propose several methods for testing gene-gene interaction in case-control association studies. Such a test can be done by aggregating SNP-SNP interaction tests performed at the SNP level (SSI) or by using gene-gene multidimensionnal methods (GGI) methods. The package also proposes tools for a graphic display of the results.

Getting started

Package details

AuthorMathieu Emily, Nicolas Sounac, Florian Kroell, Magalie Houee-Bigot
Bioconductor views GeneticVariability Genetics GenomeWideAssociation SNP
MaintainerMathieu Emily <mathieu.emily@agrocampus-ouest.fr>, Magalie Houee-Bigot <magalie.houee@agrocampus-ouest.fr>
LicenseGPL (>= 2)
Version1.13.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("MathieuEmily/GeneGeneInteR")
MathieuEmily/GeneGeneInteR documentation built on April 8, 2020, 2:28 a.m.