Files in Mirthelle/maRge
Motif Analysis in R for Genomic Exploration

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/alignTF_SNP.R R/annotateMotifsRegions.R R/catSignMotifsHOMER.R R/countSignHOMER.R R/deNovoMotifHOMER.R R/deNovoToDataFrame.R R/dictHomerMotifs.R R/drawAlignedMotifSNP.R R/getAnnoTF.R R/getCandidateTFs.R R/getMotifMatrixJASPAR.R R/getNameFromAlias.R R/getSignNamesHOMER.R README.md
data-raw/all.motifs
data-raw/create_dict_motifs_homer.R
data-raw/knownResults.txt
data-raw/table.txt
data/dictHomerMotifs.rda
maRge.Rproj
man/alignTF_SNP.Rd man/annotateMotifsRegions.Rd man/catSignMotifsHOMER.Rd man/countSignHOMER.Rd man/deNovoMotifHOMER.Rd man/deNovoToDataFrame.Rd man/dictHomerMotifs.Rd man/drawAlignedMotifSNP.Rd man/getAnnoTF.Rd man/getCandidateTFs.Rd man/getMotifMatrixJASPAR.Rd man/getNameFromAlias.Rd man/getSignNamesHOMER.Rd vignettes/candidateTFSearch.Rmd
vignettes/candidateTFSearch.html
vignettes/candidateTFSearch_cache/html/__packages
vignettes/candidateTFSearch_cache/html/unnamed-chunk-1_583dcf1836a8e7cdee941d510917968b.RData
vignettes/candidateTFSearch_cache/html/unnamed-chunk-1_583dcf1836a8e7cdee941d510917968b.rdb
vignettes/candidateTFSearch_cache/html/unnamed-chunk-1_583dcf1836a8e7cdee941d510917968b.rdx
vignettes/deNovoMotif.Rmd
vignettes/deNovoMotif.html
Mirthelle/maRge documentation built on Sept. 2, 2017, 5:42 a.m.