chrom21: Chromosome 21 for multinomial regression

Description Usage Format Examples

Description

Chromosome 21, preformatted for multinomial regression.

Usage

1
data("chrom21")

Format

A data frame with 65290 observations on the following 12 variables.

phyloP

a numeric vector

replication_timing

a numeric vector

fitCons

a numeric vector

sample_id

a factor with levels sam_BLC_TCGA_BL_A13J_01A sam_BLC_TCGA_BT_A20P_01A ... sam_UCE_TCGA_EY_A1GW_01A

cancer_type

a factor with levels BLCA BRCA CRC GBM HNSC KICH KIRC LGG LUAD LUSC PRAD SKCM THCA UCEC

strong

a numeric vector

CpG

a numeric vector

apobec

a numeric vector

I

a numeric vector

NO

a numeric vector

VA

a numeric vector

VG

a numeric vector

Examples

1
2
data(chrom21)
## maybe str(chrom21.multinom) ; plot(chrom21.multinom) ...

MultinomialMutations/MultinomialMutations documentation built on May 22, 2019, 4:39 p.m.