OHDSI/ETL-Synthea: A Builder for Converting the Synthea Data to the OMOP CDM

ETL and Builder to convert Synthea Data to the OMOP CDM. Staring with csv files for an OMOP Vocabulary and csv files for Synthea, this package creates database tables from these csv files and maps them correctly to create a full functional OMOP CDM from Synthea. As the CDM Vocabulary can be quite large, there is the option to copy the vocabulary from another schema that already has it loaded. This package assumes an RDBMS exists to which you have read/write access.

Getting started

Package details

AuthorAnthony Molinaro [aut, cre], Clair Blacketer [aut], Frank DeFalco [aut], Evanette Burrows [aut]
MaintainerEvanette Burrows <eburrow3@its.jnj.com>
LicenseApache License 2.0
Version2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("OHDSI/ETL-Synthea")
OHDSI/ETL-Synthea documentation built on March 12, 2024, 5:56 p.m.