Files in OHDSI/FeatureExtraction
Generating Features for a Cohort

.Rbuildignore
.classpath
.github/pull_request_template.md
.github/workflows/R_CMD_check_Hades.yaml
.github/workflows/R_CMD_check_main_weekly.yaml
.github/workflows/nightly_cleanup_Hades.yml
.gitignore
.project
.settings/org.eclipse.jdt.core.prefs
DESCRIPTION
FeatureExtraction.Rproj
NAMESPACE
NEWS.md R/Aggregation.R R/CompareCohorts.R R/CovariateData.R R/DefaultCovariateSettings.R R/DefaultTemporalCovariateSettings.R R/DefaultTemporalSequenceCovariateSettings.R R/DetailedCovariateSettings.R R/FeatureExtraction.R R/GetCovariates.R R/GetCovariatesFromCohortAttributes.R R/GetCovariatesFromOtherCohorts.R R/GetDefaultCovariates.R R/HelperFunctions.R R/Normalization.R R/Table1.R R/UnitTestHelperFunctions.R README.md
_pkgdown.yml
compare_versions
deploy.sh
docs/404.html
docs/articles/CreatingCovariatesBasedOnOtherCohorts.html
docs/articles/CreatingCovariatesUsingCohortAttributes.html
docs/articles/CreatingCovariatesUsingCohortAttributes_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/CreatingCovariatesUsingCohortAttributes_files/header-attrs-2.7/header-attrs.js
docs/articles/CreatingCovariatesUsingCohortAttributes_files/header-attrs-2.9/header-attrs.js
docs/articles/CreatingCustomCovariateBuilders.html
docs/articles/CreatingCustomCovariateBuildersKorean.html
docs/articles/CreatingCustomCovariateBuildersKorean_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/CreatingCustomCovariateBuildersKorean_files/header-attrs-2.7/header-attrs.js
docs/articles/CreatingCustomCovariateBuildersKorean_files/header-attrs-2.9/header-attrs.js
docs/articles/CreatingCustomCovariateBuilders_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/CreatingCustomCovariateBuilders_files/header-attrs-2.7/header-attrs.js
docs/articles/CreatingCustomCovariateBuilders_files/header-attrs-2.9/header-attrs.js
docs/articles/Untitled-1f21019f-1a2d-4b5e-85a6-26b6d323301d.png
docs/articles/Untitled-4b3d9353-8da9-49e0-967b-69bc05653585.png
docs/articles/Untitled-9bab0a34-d162-407b-aee0-0fc6224987b4.png
docs/articles/Untitled-dd762182-9d8f-4065-bddf-6282630a0f99.png
docs/articles/UsingFeatureExtraction.html
docs/articles/UsingFeatureExtractionKorean.html
docs/articles/UsingFeatureExtractionKorean_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/UsingFeatureExtractionKorean_files/header-attrs-2.7/header-attrs.js
docs/articles/UsingFeatureExtractionKorean_files/header-attrs-2.9/header-attrs.js
docs/articles/UsingFeatureExtraction_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/UsingFeatureExtraction_files/header-attrs-2.7/header-attrs.js
docs/articles/UsingFeatureExtraction_files/header-attrs-2.9/header-attrs.js
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/pull_request_template.html
docs/reference/CovariateData-class.html
docs/reference/FeatureExtraction-package.html
docs/reference/FeatureExtraction.html
docs/reference/Rplot001.png
docs/reference/aggregateCovariates.html
docs/reference/byMaxFf.html
docs/reference/bySumFf.html
docs/reference/computeStandardizedDifference.html
docs/reference/convertPrespecSettingsToDetailedSettings.html
docs/reference/createAnalysisDetails.html
docs/reference/createCohortAttrCovariateSettings.html
docs/reference/createCohortBasedCovariateSettings.html
docs/reference/createCohortBasedTemporalCovariateSettings.html
docs/reference/createCovariateSettings.html
docs/reference/createDefaultCovariateSettings.html
docs/reference/createDefaultTemporalCovariateSettings.html
docs/reference/createDetailedCovariateSettings.html
docs/reference/createDetailedTemporalCovariateSettings.html
docs/reference/createEmptyCovariateData.html
docs/reference/createHdpsCovariateSettings.html
docs/reference/createTable1.html
docs/reference/createTable1CovariateSettings.html
docs/reference/createTemporalCovariateSettings.html
docs/reference/createTemporalSequenceCovariateSettings.html
docs/reference/dot-createLooCovariateSettings.html
docs/reference/dot-getDbLooCovariateData.html
docs/reference/filterByCohortDefinitionId.html
docs/reference/filterByRowId.html
docs/reference/getDbCohortAttrCovariatesData.html
docs/reference/getDbCohortBasedCovariatesData.html
docs/reference/getDbCovariateData.html
docs/reference/getDbDefaultCovariateData.html
docs/reference/getDbHdpsCovariateData.html
docs/reference/getDefaultTable1Specifications.html
docs/reference/index.html
docs/reference/isAggregatedCovariateData.html
docs/reference/isCovariateData.html
docs/reference/isTemporalCovariateData.html
docs/reference/loadCovariateData.html
docs/reference/saveCovariateData.html
docs/reference/tidyCovariateData.html
docs/sitemap.xml
extras/CohortBasedCovariatesVignetteDataFetch.R extras/DefaultCovariateSettingsTemplate.R extras/DetailedCovariateSettingsTemplate.R extras/FeatureExtraction.pdf extras/GetHdpsCovariates.R extras/PackageMaintenance.R extras/TestCode.R extras/VignetteDataFetch.R
inst/csv/OtherParameters.csv
inst/csv/OtherSqlToLoad.csv
inst/csv/PrespecAnalyses.csv
inst/csv/PrespecTemporalAnalyses.csv
inst/csv/PrespecTemporalSequenceAnalyses.csv
inst/csv/Table1Specs.csv
inst/csv/jarChecksum.txt
inst/doc/CreatingCovariatesBasedOnOtherCohorts.pdf inst/doc/CreatingCovariatesUsingCohortAttributes.pdf inst/doc/CreatingCustomCovariateBuilders.pdf inst/doc/CreatingCustomCovariateBuildersKorean.pdf inst/doc/UsingFeatureExtraction.pdf inst/doc/UsingFeatureExtractionKorean.pdf
inst/java/SqlRender-1.15.0.jar
inst/java/featureExtraction-3.3.0-SNAPSHOT.jar
inst/java/json-20230227.jar
inst/sql/sql_server/CareSite.sql
inst/sql/sql_server/Chads2.sql
inst/sql/sql_server/Chads2Vasc.sql
inst/sql/sql_server/CharlsonIndex.sql
inst/sql/sql_server/CohortBasedBinaryCovariates.sql
inst/sql/sql_server/CohortBasedCountCovariates.sql
inst/sql/sql_server/ConceptCounts.sql
inst/sql/sql_server/CreateCovAnalysisRefTables.sql
inst/sql/sql_server/Dcsi.sql
inst/sql/sql_server/DemographicsAge.sql
inst/sql/sql_server/DemographicsAgeGroup.sql
inst/sql/sql_server/DemographicsEthnicity.sql
inst/sql/sql_server/DemographicsGender.sql
inst/sql/sql_server/DemographicsMonth.sql
inst/sql/sql_server/DemographicsRace.sql
inst/sql/sql_server/DemographicsTime.sql
inst/sql/sql_server/DemographicsYear.sql
inst/sql/sql_server/DemographicsYearMonth.sql
inst/sql/sql_server/DomainConcept.sql
inst/sql/sql_server/DomainConceptGroup.sql
inst/sql/sql_server/GetAttrCovariates.sql
inst/sql/sql_server/GetHdpsCovariates.sql
inst/sql/sql_server/Hfrs.sql
inst/sql/sql_server/IncludeDescendants.sql
inst/sql/sql_server/MeasurementRangeGroup.sql
inst/sql/sql_server/MeasurementValue.sql
inst/sql/sql_server/RemoveCovariateTempTables.sql
inst/sql/sql_server/covariateCohorts.sql
inst/sql/sql_server/unit_tests/createTestingData.sql
inst/sql/sql_server/unit_tests/dropTestingData.sql
inst/testdata/binaryCovariateData.zip
inst/testdata/continuousCovariateData.zip
java/FeatureExtraction.jardesc
java/org/ohdsi/featureExtraction/FeatureExtraction.java
java/org/ohdsi/featureExtraction/JarChecksum.java
java/org/ohdsi/featureExtraction/ReadCSVFile.java
java/org/ohdsi/featureExtraction/ReadCSVFileWithHeader.java
java/org/ohdsi/featureExtraction/Row.java
java/org/ohdsi/featureExtraction/StringUtilities.java
man-roxygen/GetCovarParams.R man/CovariateData-class.Rd man/FeatureExtraction-package.Rd man/aggregateCovariates.Rd man/computeStandardizedDifference.Rd man/convertPrespecSettingsToDetailedSettings.Rd man/createAnalysisDetails.Rd man/createCohortAttrCovariateSettings.Rd man/createCohortBasedCovariateSettings.Rd man/createCohortBasedTemporalCovariateSettings.Rd man/createCovariateSettings.Rd man/createDefaultCovariateSettings.Rd man/createDefaultTemporalCovariateSettings.Rd man/createDetailedCovariateSettings.Rd man/createDetailedTemporalCovariateSettings.Rd man/createEmptyCovariateData.Rd man/createTable1.Rd man/createTable1CovariateSettings.Rd man/createTemporalCovariateSettings.Rd man/createTemporalSequenceCovariateSettings.Rd man/dot-createLooCovariateSettings.Rd man/dot-getDbLooCovariateData.Rd man/filterByCohortDefinitionId.Rd man/filterByRowId.Rd man/getDbCohortAttrCovariatesData.Rd man/getDbCohortBasedCovariatesData.Rd man/getDbCovariateData.Rd man/getDbDefaultCovariateData.Rd man/getDefaultTable1Specifications.Rd man/isAggregatedCovariateData.Rd man/isCovariateData.Rd man/isTemporalCovariateData.Rd man/loadCovariateData.Rd man/saveCovariateData.Rd man/tidyCovariateData.Rd
nbactions.xml
pom.xml
tests/testOracle.R tests/testPostgres.R tests/testRedshift.R tests/testSqlServer.R tests/testSqlite.R tests/testthat/setup.R tests/testthat/test-Aggregation.R tests/testthat/test-CompareCohorts.R tests/testthat/test-CovariateData.R tests/testthat/test-DetailedCovariateSettings.R tests/testthat/test-FeatureExtractionInternal.R tests/testthat/test-GetCohortBasedCovariates.R tests/testthat/test-GetCovariates.R tests/testthat/test-GetCovariatesFromCohortAttributes.R tests/testthat/test-GetCovariatesTemporalSequence.R tests/testthat/test-GetDefaultCovariates.R tests/testthat/test-HelperFunctions.R tests/testthat/test-PrespecAnalyses.R tests/testthat/test-Table1.R tests/testthat/test-query-no-fail.R tests/testthat/test-spot-checks.R tests/testthat/test-tidyCovariates.R vignettes/CreatingCovariatesBasedOnOtherCohorts.Rmd vignettes/CreatingCovariatesUsingCohortAttributes.Rmd vignettes/CreatingCustomCovariateBuilders.Rmd vignettes/CreatingCustomCovariateBuildersKorean.Rmd vignettes/UsingFeatureExtraction.Rmd vignettes/UsingFeatureExtractionKorean.Rmd
OHDSI/FeatureExtraction documentation built on March 7, 2024, 2:47 p.m.