Files in OpenMx/OpenMx

Extended Structural Equation Modelling

.Rbuildignore.in

.covrignore

.devmode

.dir-locals.el

.editorconfig

.gdbinit

.gitattributes

.github/workflows/test.yml

.gitignore

.travis.yml

CONTRIBUTING

DESCRIPTION

DESCRIPTION.in

Makefile

NAMESPACE

NEWS.md

NOTICE

OpenMx.Rproj

R/0ClassUnion.R R/DefinitionVars.R R/DiagMatrix.R R/FullMatrix.R R/IdenMatrix.R R/LowerMatrix.R R/MxAlgebra.R R/MxAlgebraConvert.R R/MxAlgebraFunctions.R R/MxAlgebraObjective.R R/MxApply.R R/MxAutoStart.R R/MxAvailableOptimizers.R R/MxBaseNamed.R R/MxBounds.R R/MxCommunication.R R/MxCompare.R R/MxCompute.R R/MxConstraint.R R/MxCycleDetection.R R/MxData.R R/MxDataWLS.R R/MxDeparse.R R/MxDependencies.R R/MxDetectCores.R R/MxErrorHandling.R R/MxEval.R R/MxExpectation.R R/MxExpectationBA81.R R/MxExpectationGREML.R R/MxExpectationHiddenMarkov.R R/MxExpectationLISREL.R R/MxExpectationMixture.R R/MxExpectationNormal.R R/MxExpectationRAM.R R/MxExpectationStateSpace.R R/MxExponential.R R/MxFIMLObjective.R R/MxFactorScores.R R/MxFitFunction.R R/MxFitFunctionAlgebra.R R/MxFitFunctionGREML.R R/MxFitFunctionML.R R/MxFitFunctionMultigroup.R R/MxFitFunctionR.R R/MxFitFunctionRow.R R/MxFitFunctionWLS.R R/MxFlatModel.R R/MxFlatSearchReplace.R R/MxGraph.R R/MxGraphviz.R R/MxInterval.R R/MxLISRELModel.R R/MxLISRELObjective.R R/MxMI.R R/MxMLObjective.R R/MxMMI.R R/MxMatrix.R R/MxMatrixFunctions.R R/MxModel.R R/MxModelDisplay.R R/MxModelFunctions.R R/MxModelParameters.R R/MxMultiModel.R R/MxNamespace.R R/MxObjectiveMetaData.R R/MxOptions.R R/MxPPML.R R/MxPath.R R/MxPenalty.R R/MxPredict.R R/MxRAMModel.R R/MxRAMObjective.R R/MxRAMtoML.R R/MxRObjective.R R/MxRename.R R/MxReservedNames.R R/MxRestore.R R/MxRetro.R R/MxRobustSE.R R/MxRowObjective.R R/MxRun.R R/MxRunHelperFunctions.R R/MxSE.R R/MxSaturatedModel.R R/MxSearchReplace.R R/MxSquareBracket.R R/MxSummary.R R/MxSwift.R R/MxThreshold.R R/MxTryHard.R R/MxTypes.R R/MxUnitTesting.R R/MxUntitled.R

R/MxVersion.R.in

R/OriginalMx.R R/SdiagMatrix.R R/StandMatrix.R R/SymmMatrix.R R/UnitMatrix.R R/ZeroMatrix.R R/cache.R R/omxBrownie.R R/omxConstrainThresholds.R R/omxGetNPSOL.R R/omxReadGRMBin.R R/zzz.R README.md

_config.yml

cleanup

codecov.yml

configure

configure.win

data/Bollen.txt

data/HS.ability.data.txt

data/LongitudinalOverdispersedCounts.rda

data/Oscillator.txt

data/demoOneFactor.csv

data/demoTwoFactor.csv

data/dzfData.txt

data/dzmData.txt

data/dzoData.txt

data/example1.csv

data/example2.csv

data/factorExample1.csv

data/factorScaleExample1.csv

data/factorScaleExample2.csv

data/jointdata.rda

data/latentMultipleRegExample1.csv

data/latentMultipleRegExample2.csv

data/lazarsfeld.csv

data/multiData1.txt

data/myAutoregressiveData.txt

data/myFADataRaw.txt

data/myGrowthKnownClassData.txt

data/myGrowthMixtureData.txt

data/myLongitudinalData.txt

data/myRegData.txt

data/myRegDataRaw.txt

data/myTwinData.txt

data/mzfData.txt

data/mzmData.txt

data/nhanesDemo.rda

data/nuclear_twin_design_data.txt

data/numHess1.txt

data/numHess2.txt

data/ordinalTwinData.rda

data/twinData.rda

data/twin_NA_dot.txt

demo/00Index

demo/AlternativeApproaches.R demo/BivariateCorrelation.R demo/BivariateHeterogeneity_MatrixRaw.R demo/BivariateHeterogeneity_PathRaw.R demo/BivariateSaturated.R demo/BivariateSaturated_MatrixCov.R demo/BivariateSaturated_MatrixCovCholesky.R demo/BivariateSaturated_MatrixRaw.R demo/BivariateSaturated_MatrixRawCholesky.R demo/BivariateSaturated_PathCov.R demo/BivariateSaturated_PathRaw.R demo/DefinitionMeans_MatrixRaw.R demo/DefinitionMeans_PathRaw.R demo/GrowthMixtureModel_MatrixRaw.R demo/GrowthMixtureModel_PathRaw.R demo/LDE.R demo/LISRELJointFactorModel.R demo/LatentGrowthCurveModel_MatrixRaw.R demo/LatentGrowthCurveModel_PathRaw.R demo/LatentGrowthCurveModel_PathRaw_ModelRec.R demo/LatentGrowthCurveModel_PathRaw_ObjectAdd.R demo/MatrixAlgebra.R demo/MultipleRegression_MatrixCov.R demo/MultipleRegression_MatrixRaw.R demo/MultipleRegression_PathCov.R demo/MultipleRegression_PathRaw.R demo/MultivariateRegression_MatrixCov.R demo/MultivariateRegression_MatrixRaw.R demo/MultivariateRegression_PathCov.R demo/MultivariateRegression_PathRaw.R demo/OneFactorJoint_MatrixRawRAM.R demo/OneFactorJoint_PathRaw.R demo/OneFactorMatrixDemo.R demo/OneFactorModel_LikelihoodVector.R demo/OneFactorModel_MatrixCov.R demo/OneFactorModel_MatrixRaw.R demo/OneFactorModel_PathCov.R demo/OneFactorModel_PathRaw.R demo/OneFactorOrdinal01_MatrixRaw.R demo/OneFactorOrdinal_MatrixRaw.R demo/OneFactorOrdinal_MatrixRawRAM.R demo/OneFactorOrdinal_PathRaw.R demo/OneFactorPathDemo.R demo/OneLocusLikelihood.R demo/RObjectiveLISRELFactorRegression.R demo/RowObjectiveFIMLBivariateSaturated.R demo/RowObjectiveSimpleExamples.R demo/SimpleCheckpoint.R demo/SimpleRegression_MatrixCov.R demo/SimpleRegression_MatrixRaw.R demo/SimpleRegression_PathCov.R demo/SimpleRegression_PathRaw.R demo/TwoFactorModel_MatrixCov.R demo/TwoFactorModel_MatrixRaw.R demo/TwoFactorModel_PathCov.R demo/TwoFactorModel_PathRaw.R demo/TwoLocusLikelihood.R demo/UnivariateSaturated.R demo/UnivariateSaturated_MatrixCov.R demo/UnivariateSaturated_MatrixRaw.R demo/UnivariateSaturated_PathCov.R demo/UnivariateSaturated_PathRaw.R demo/UnivariateTwinAnalysis.R demo/UnivariateTwinAnalysis_MatrixRaw.R demo/UnivariateTwinAnalysis_PathRaw.R

demo/data/BivariateHeterogeneity1.csv

demo/data/BivariateHeterogeneity2.csv

demo/mxThreshold.R demo/omxConstrainMLThresholds.R

docs/.gitignore

docs/Makefile

docs/extract

docs/make.bat

docs/rcheck

docs/source/.gitignore

docs/source/Advanced_Concepts.rst

docs/source/AlternativeApproaches.rst

docs/source/DefinitionMeans_Matrix.rst

docs/source/DefinitionMeans_Path.rst

docs/source/Examples_Matrix.rst

docs/source/Examples_Path.rst

docs/source/FIML_RowFit.rst

docs/source/FactorAnalysisOrdinal_Matrix.rst

docs/source/FactorAnalysis_Matrix.rst

docs/source/FactorAnalysis_Path.rst

docs/source/File_Checkpointing.rst

docs/source/GeneticEpi_Matrix.rst

docs/source/GeneticEpi_Path.rst

docs/source/GrowthMixtureModel_Matrix.rst

docs/source/GrowthMixtureModel_Path.rst

docs/source/Internals.rst

docs/source/Introduction.rst

docs/source/ItemFactorAnalysis.rst

docs/source/Likelihood_Matrix.rst

docs/source/Multicore_Execution.rst

docs/source/MultipleGroups_Matrix.rst

docs/source/MultipleGroups_Path.rst

docs/source/NewBeginnersGuide.rst

docs/source/Ordinal_Matrix.rst

docs/source/Ordinal_Path.rst

docs/source/Regression_Matrix.rst

docs/source/Regression_Path.rst

docs/source/TimeSeries_Matrix.rst

docs/source/TimeSeries_Path.rst

docs/source/changes.rst

docs/source/conf.py.in

docs/source/csolnp.rst

docs/source/ext/numfig.py

docs/source/graph/BivariateSaturatedModel.png

docs/source/graph/DefinitionMeansModel.png

docs/source/graph/GrowthCurveModel.png

docs/source/graph/HeterogeneityModel.png

docs/source/graph/Histogram_testData.png

docs/source/graph/MultipleRegression.png

docs/source/graph/MultivariateRegression.png

docs/source/graph/OneFactorFiveIndicators.png

docs/source/graph/OneFactorModel.png

docs/source/graph/OneFactorModel5vt.png

docs/source/graph/SimpleRegression.png

docs/source/graph/ThresholdModel.png

docs/source/graph/TwinACEModelDZ.png

docs/source/graph/TwinACEModelMZ.png

docs/source/graph/TwoFactorModel.png

docs/source/graph/UnivariateSaturatedModel.png

docs/source/graph/UnivariateSaturatedModelNoMean.png

docs/source/index.rst

docs/source/openmx_theme/static/openmx_theme.css

docs/source/openmx_theme/theme.conf

docs/substVersion

inst/CITATION

inst/WORDLIST

inst/models/codeRed/fail_on_re-run_entity_already_exists.R inst/models/codeRed/umxACE_codeRed.R inst/models/enormous/RAM-3Factor-120Indicators-covdata-a.R inst/models/enormous/RAM-3Factor-192Indicators-covdata-a.R inst/models/enormous/RAM-3Factor-192Indicators-rawdata-a.R inst/models/enormous/RAM-3Factor-96Indicators-rawdata-a.R inst/models/enormous/ifa-2pl-se.R inst/models/enormous/ifa-3pl-se.R inst/models/enormous/ifa-4pl-se.R inst/models/enormous/ifa-bifactor-se.R inst/models/enormous/ifa-cyh2011-sim1.R inst/models/enormous/ifa-cyh2011-sim2.R inst/models/enormous/ifa-grm-se.R inst/models/enormous/invert.R inst/models/enormous/lib/stderrlib.R inst/models/enormous/ot2kSim.R inst/models/enormous/rampart.R inst/models/enormous/wu-neale-2012-lgc.R inst/models/failing/All_models_that_seem_fine/ComputeOrderError.R inst/models/failing/CSOLNPmtcars.R inst/models/failing/MultilevelLongFormatFailing.R inst/models/failing/OrdinalLargeSample.R inst/models/failing/PPML_test2L3M.R inst/models/failing/PPML_test2L4M.R inst/models/failing/PPML_test2L4M_MultiLayer.R inst/models/failing/SimpleConfidenceIntervals.R inst/models/failing/check_RAM_paths_dont_overwrite.R inst/models/failing/lacks_mention_of_what_fails/NTF_design.R

inst/models/failing/memprobmodel2.RData

inst/models/failing/mice.R

inst/models/failing/mx-scripts/Autoregressive_MatrixCov.mx

inst/models/failing/mx-scripts/Autoregressive_MatrixRaw.mx

inst/models/failing/mx-scripts/MultipleRegression_MatrixCov.mx

inst/models/failing/mx-scripts/MultipleRegression_MatrixRaw.mx

inst/models/failing/mx-scripts/MultivariateRegression_MatrixCov.mx

inst/models/failing/mx-scripts/MultivariateRegression_MatrixRaw.mx

inst/models/failing/mx-scripts/SimpleRegression_MatrixRaw.mx

inst/models/failing/mx-scripts/TwoFactorModel_MatrixCov.mx

inst/models/failing/mx-scripts/TwoFactorModel_MatrixRaw.mx

inst/models/failing/mx-scripts/myAutoregressiveData.txt

inst/models/failing/mx-scripts/myFAData.txt

inst/models/failing/mx-scripts/myRegData.txt

inst/models/failing/no_longer_able_to_be_run/BivariateSaturated_WLSMatrixCov.R inst/models/failing/no_longer_able_to_be_run/ExtraOrdinalVars.R inst/models/failing/no_longer_able_to_be_run/PPML_100days.R inst/models/failing/no_longer_able_to_be_run/UnivariateTwinAnalysis20090925.R inst/models/failing/no_longer_able_to_be_run/categoricalDefinitionTest.R inst/models/failing/no_longer_able_to_be_run/challengingCI.R inst/models/failing/test-weight.R inst/models/failing/thresholdsCross.R inst/models/nightly/180209--defvars.R inst/models/nightly/3LatentMultiRegWith2LevelModerator-a.R inst/models/nightly/3LatentMultiRegWith2LevelModerator-b.R inst/models/nightly/3LatentMultiRegWith2LevelModerator-c.R inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-a.R inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-b.R inst/models/nightly/3LatentMultiRegWith2LevelModeratorAndMissing-c.R inst/models/nightly/3LatentMultiRegWithContinuousModerator-a.R inst/models/nightly/3LatentMultiRegWithContinuousModerator-b.R inst/models/nightly/3LatentMultiRegWithContinuousModerator-c.R inst/models/nightly/3LatentMultiRegWithContinuousModerator-d.R inst/models/nightly/3LatentMultiRegWithContinuousModerator-e.R inst/models/nightly/AnalyticGradientTest.R inst/models/nightly/BootLRT.R inst/models/nightly/BootstrapParallelNightly.R inst/models/nightly/CSOLNP_segfault_regression_test--unidentifed_EFA.R inst/models/nightly/ContinuousTime.R inst/models/nightly/DefaultOptTolerance.R inst/models/nightly/DefinitionIloo.R inst/models/nightly/ETC88.R inst/models/nightly/Extreme_Multiformity_chi.R inst/models/nightly/GREML_infoMat_test.R inst/models/nightly/GREML_monophenotype_1GRM.R inst/models/nightly/GREML_monophenotype_1GRM_GradDesc.R inst/models/nightly/GrowthMixtureModelRandomStarts.R inst/models/nightly/InvalidComparisonDetection.R inst/models/nightly/JointAutoStrat.R inst/models/nightly/JointMissingTest.R inst/models/nightly/JointWLS.R inst/models/nightly/LegacyContinuousOnlyWLSTest.R inst/models/nightly/LegacyWLS+CI.R inst/models/nightly/MIMIC.R inst/models/nightly/ModificationIndexCheck.R inst/models/nightly/MultigroupRobustSE_test.R inst/models/nightly/MultigroupWLS.R inst/models/nightly/MultilevelStateSpaceEx5.R inst/models/nightly/MxTryHardTest.R inst/models/nightly/NelderMeadUnitTesting.R inst/models/nightly/OneFactorOrdinal01_MatrixRaw.R inst/models/nightly/OneFactorOrdinal_MatrixRaw.R inst/models/nightly/PPML_100days.R inst/models/nightly/PPML_100days_cov.R inst/models/nightly/PPML_100days_cov_baseline.R inst/models/nightly/PPML_100days_raw.R inst/models/nightly/PPML_100days_raw_baseline.R inst/models/nightly/PPML_test1L2M.R inst/models/nightly/PPML_test1L3M.R inst/models/nightly/ParamBoot2.R inst/models/nightly/Power1.R inst/models/nightly/Power2.R inst/models/nightly/RAM-3Factor-12Indicators-covdata-a.R inst/models/nightly/RAM-3Factor-12Indicators-rawdata-a.R inst/models/nightly/RAM-3Factor-24Indicators-covdata-a-intervals.R inst/models/nightly/RAM-3Factor-24Indicators-covdata-a.R inst/models/nightly/RAM-3Factor-24Indicators-megadata-a.R inst/models/nightly/RAM-3Factor-24Indicators-rawdata-a.R inst/models/nightly/RAM-3Factor-48Indicators-covdata-a.R inst/models/nightly/RAM-3Factor-48Indicators-rawdata-a.R inst/models/nightly/RAM-3Factor-96Indicators-covdata-a.R inst/models/nightly/RampartDimnames.R inst/models/nightly/RegimeSwitching_MatrixRawNoCholDifferentTransitions.R inst/models/nightly/RegimeSwitching_MatrixRawNoCholDifferentTransitionsAllFixed.R inst/models/nightly/SimpleMix.R inst/models/nightly/SkippedRows.R inst/models/nightly/StateSpaceContinuous.R inst/models/nightly/StateSpaceLatentGrowth.R inst/models/nightly/brooke.R

inst/models/nightly/data/ContinuousTime.csv

inst/models/nightly/data/NCSsim.dat

inst/models/nightly/data/cai2009.csv

inst/models/nightly/data/dLL.csv

inst/models/nightly/data/ex9.11.dat

inst/models/nightly/data/ex9.12.dat

inst/models/nightly/data/ex9.1a.dat

inst/models/nightly/data/ex9.23.dat

inst/models/nightly/data/ex9.6.dat

inst/models/nightly/data/faces.xxm.RData

inst/models/nightly/data/fakeSTARTSMissing.csv

inst/models/nightly/data/fakeSTARTSNoMissing.csv

inst/models/nightly/data/g341-19.dat

inst/models/nightly/data/hcfa.xxm.RData

inst/models/nightly/data/lranslp.xxm.RData

inst/models/nightly/data/mlcfa.xxm.RData

inst/models/nightly/data/ms-data.csv

inst/models/nightly/data/reisby.long.xxm.RData

inst/models/nightly/data/reisby.wide.xxm.RData

inst/models/nightly/data/sel.txt

inst/models/nightly/fm-example2-1.R inst/models/nightly/fm-example2-4.R inst/models/nightly/fm-example2-8.R inst/models/nightly/grm_in_fiml.R inst/models/nightly/ifa-2d-mg.R inst/models/nightly/ifa-bifactor.R inst/models/nightly/ifa-cai2009.R inst/models/nightly/ifa-dLL.R inst/models/nightly/ifa-drm-wide.R inst/models/nightly/ifa-fisher-info.R inst/models/nightly/ifa-latent-2d.R inst/models/nightly/ifa-meat-2d.R inst/models/nightly/ifa-meat-2tier.R inst/models/nightly/ifa-ms.R inst/models/nightly/mplus-ex9.1.R inst/models/nightly/mplus-ex9.11.R inst/models/nightly/mplus-ex9.12.R inst/models/nightly/mplus-ex9.23.R inst/models/nightly/mplus-ex9.6.R inst/models/nightly/multilevelLatentRegression2.R inst/models/nightly/multimodelInferenceTest.R inst/models/nightly/mxPowerDetail.R inst/models/nightly/mxSE-defvar.R inst/models/nightly/startsTestMissing.R inst/models/nightly/startsTestNoMissing.R inst/models/nightly/test-LatentAR-190605.R inst/models/nightly/testPolychoricMatrix.R inst/models/nightly/thresholdModel1Factor3Variate.R inst/models/nightly/thresholdModel1Factor5Variate.R inst/models/nightly/thresholdModel1Factor5VariateWLS.R inst/models/nightly/thresholdModel1Factor8Variate.R inst/models/nightly/univACErSEM.R inst/models/nightly/wu-neale-2012-lgc.R inst/models/nightly/wu-neale-2012-symmetry.R inst/models/nightly/xxm-cfars.R inst/models/nightly/xxm-faces.R inst/models/nightly/xxm-hcfa.R inst/models/nightly/xxm-lgc.R inst/models/nightly/xxm-mlcfa.R inst/models/passing/ACEDuplicateMatrices.R inst/models/passing/Acemix.R inst/models/passing/Acemix2.R inst/models/passing/AlgebraDeriv.R inst/models/passing/AlgebraErrorDetection.R inst/models/passing/AlgebraTransformations.R inst/models/passing/AnalyticConstraintJacobians--Eq_and_Ineq.R inst/models/passing/AnalyticConstraintJacobians--PowellBenchmark.R inst/models/passing/AugmentedGREMLfitfunction.R inst/models/passing/Autoregressive_MatrixCov.R inst/models/passing/Autoregressive_MatrixRaw.R inst/models/passing/Autoregressive_PathCov.R inst/models/passing/Autoregressive_PathRaw.R inst/models/passing/Autoregressive_Transpose_MatrixCov.R inst/models/passing/Autoregressive_Transpose_MatrixRaw.R inst/models/passing/Autoregressive_Tree_Matrix.R inst/models/passing/Autoregressive_Tree_Path.R inst/models/passing/BivRegRawTestSE.R inst/models/passing/BivRegStdTestSE.R inst/models/passing/BogusDefinitionVariables.R inst/models/passing/BootstrapParallel.R inst/models/passing/BukinN2_regressiontest.R inst/models/passing/CIduplicates.R inst/models/passing/CheckpointingEveryIteration.R inst/models/passing/ConfidenceIntervalsDefVar.R inst/models/passing/ContinuousOnlyWLSTest.R inst/models/passing/DataFrame.R inst/models/passing/DefaultComputePlanTest.R inst/models/passing/DefinitionMeans.R inst/models/passing/DefinitionMeansPath.R inst/models/passing/DogChain.R inst/models/passing/EvaluateOnGrid.R inst/models/passing/FIMLLikelihoodFrontend.R inst/models/passing/FitMultigroup.R inst/models/passing/FixedAlgebra.R inst/models/passing/FourAAAA.R inst/models/passing/GREML--151123missingDataRegressionTest.R inst/models/passing/GREML--minimal_test_model.R inst/models/passing/GREML--polyphenotype.R inst/models/passing/GREML--testStarterFunctionWithMissingData.R inst/models/passing/GREML_intercept_check.R inst/models/passing/GREML_partial_gradients.R inst/models/passing/GREML_partial_gradients_EI.R inst/models/passing/GenSA.R inst/models/passing/GeneralizedEstimatingEquations.R inst/models/passing/GraphvizTest.R inst/models/passing/HMM-basic.R inst/models/passing/HMM-defvar.R inst/models/passing/HMM-multigroup.R inst/models/passing/IgnoreFixedConfidenceIntervals.R inst/models/passing/Infeasible.R inst/models/passing/InitializationErrorDetection.R inst/models/passing/IntroSEM-BivariateRaw.R inst/models/passing/IntroSEM-BivariateStd.R inst/models/passing/IntroSEM-MultiRegRaw.R inst/models/passing/IntroSEM-MultiRegStd.R inst/models/passing/IntroSEM-MultivariateRegRaw.R inst/models/passing/IntroSEM-OneFactorCov.R inst/models/passing/IntroSEM-OneFactorRaw.R inst/models/passing/IntroSEM-ThreeFactorScale1Test.R inst/models/passing/IntroSEM-ThreeFactorScale2Test.R inst/models/passing/IntroSEM-ThreeLatentMediationTest1.R inst/models/passing/IntroSEM-ThreeLatentMediationTest2.R inst/models/passing/IntroSEM-ThreeLatentMultipleRegTest1.R inst/models/passing/IntroSEM-ThreeLatentMultipleRegTest2.R inst/models/passing/IntroSEM-UnivariateRaw.R inst/models/passing/IntroSEM-UnivariateStd.R inst/models/passing/InvalidCovarianceMLObjective.R inst/models/passing/InvalidWLS.R inst/models/passing/JiggleTest.R inst/models/passing/JointFIMLRegressionTest.R inst/models/passing/JointFIMLTest.R inst/models/passing/LAD--CheckCode6.R inst/models/passing/LCAlazarsfeld-rewrite.R inst/models/passing/LCAlazarsfeld.R inst/models/passing/LGC_MatrixCov.R inst/models/passing/LGC_PathCov.R inst/models/passing/LISRELExoEndoOnly.R inst/models/passing/LISRELFactorRegressionWithMeansFIMLOrder_MatrixRaw.R inst/models/passing/LISRELFactorRegressionWithMeans_Matrix.R inst/models/passing/LISRELFactorRegressionWithMeans_MatrixRaw.R inst/models/passing/LISRELFactorRegression_Matrix.R inst/models/passing/LisrelTypeCheck.R inst/models/passing/MLErrorConditions.R inst/models/passing/MatrixCreation.R inst/models/passing/MixtureByEM.R inst/models/passing/ModelIndexErrorChecking.R inst/models/passing/ModelRemovePaths.R inst/models/passing/ModelTransformTest.R inst/models/passing/MultiRegStdTestSE.R inst/models/passing/MultilevelUniRandomSlopeInt.R inst/models/passing/MultipleGroupML.R inst/models/passing/MultipleGroupRAM.R inst/models/passing/MultipleGroupRAMconstraint.R inst/models/passing/MultipleGroupWLS.R inst/models/passing/MultipleRegression_MatrixRawReverse.R inst/models/passing/MultivariateConstraint.R inst/models/passing/MvtGradientTest.R inst/models/passing/MxEvalDefinitionVar.R inst/models/passing/MxPath.R inst/models/passing/NA-defvar.R inst/models/passing/NameParameterOverlap.R inst/models/passing/NamesReferencesErrorDetection.R inst/models/passing/NelderMeadErrorTesting.R inst/models/passing/NelderMeadTest--eqConstraint.R inst/models/passing/NelderMeadTest--ineqConstraints.R inst/models/passing/NelderMeadTest.R inst/models/passing/NormalML.R inst/models/passing/OnDemandAlgebra.R inst/models/passing/OneFactorModel_PathCovReverse.R inst/models/passing/OrdinalPathTest.R inst/models/passing/OrdinalTest.R inst/models/passing/OrdinalTestAlgebra.R inst/models/passing/PartialAnalyticDeriv.R inst/models/passing/PearsonSelection.R inst/models/passing/PowerError.R inst/models/passing/RAM-FIML-defvars.R inst/models/passing/RAMInverseTest.R inst/models/passing/RAMObjectiveErrors.R inst/models/passing/Rampart0.R inst/models/passing/Rampart1.R inst/models/passing/RawCov.R inst/models/passing/RemoveEntriesTest.R inst/models/passing/RenameAndSummary.R inst/models/passing/SanityTest.R 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man-roxygen/args-chkpt.R man-roxygen/args-dots-barrier.R man-roxygen/args-model.R man-roxygen/args-regularize.R man-roxygen/args-verbose.R man-roxygen/ref-manual.R man/Bollen_data.Rd man/HS.ability.data.Rd man/LongitudinalOverdispersedCounts.Rd man/MxAlgebra-class.Rd man/MxBounds-class.Rd man/MxCI-class.Rd man/MxConstraint-class.Rd man/MxData-class.Rd man/MxExpectationGREML-class.Rd man/MxFitFunctionGREML-class.Rd man/MxMMI.Rd man/MxMatrix-class.Rd man/MxModel-class.Rd man/Named-entity.Rd man/Oscillator_data.Rd

man/README

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src/RAMInternal.h

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tests/testthat.R tests/testthat/test-268.R tests/testthat/test-ACELRTCI20160808.R tests/testthat/test-AlgebraComputePassing.R tests/testthat/test-ConstantSubst.R tests/testthat/test-DataErrorDetection.R tests/testthat/test-FactorScores.R tests/testthat/test-GREML_Error_Detection.R tests/testthat/test-LegacyMultipleGroupWLS.R tests/testthat/test-MatrixErrorDetection.R tests/testthat/test-ModelIdentification.R tests/testthat/test-NelderMead--bothConstraintTypes.R tests/testthat/test-WLS-acov.R tests/testthat/test-defvar.R tests/testthat/test-discrete.R tests/testthat/test-dmvnorm.R tests/testthat/test-gendata-cov.R tests/testthat/test-gendata-multilevel.R tests/testthat/test-ifa-drm1.R tests/testthat/test-loadDataByCol.R tests/testthat/test-loadDataByRow.R tests/testthat/test-mxBounds.R tests/testthat/test-mxSE.R tests/testthat/test-mxsave.R tests/testthat/test-naAction.R tests/testthat/test-npdWarningWLS.R tests/testthat/test-omp.R tests/testthat/test-pearsonSel.R tests/testthat/test-plus-overloading.R tests/testthat/test-simplestCI.R tests/testthat/test-wls-binary.R

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vignettes/reg_mimic.Rmd vignettes/regularization.Rmd

OpenMx/OpenMx documentation built on April 17, 2024, 3:32 p.m.