Files in OuhscBbmc/REDCapR

Interaction Between R and REDCap

.Rbuildignore

.gitattributes

.github/.gitignore

.github/ISSUE_TEMPLATE/unexpected-behavior-issue-template.md

.github/dependabot.yml

.github/workflows/check-release.yaml

.github/workflows/pkgdown.yaml

.gitignore

.lintr

.markdownlint.json

.vscode/settings.json

CONDUCT.md

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/REDCapR-package.R R/constant.R R/create-batch-glossary.R R/helpers-testing.R R/kernel-api.R R/metadata-utilities.R R/project-dag-write.R R/project-delete-multiple-arm.R R/project-delete-single-arm.R R/project-simple.R R/redcap-arm-export.R R/redcap-column-sanitize.R R/redcap-dag-read.R R/redcap-delete.R R/redcap-event-instruments.R R/redcap-event-read.R R/redcap-file-download-oneshot.R R/redcap-file-upload-oneshot.R R/redcap-instrument-download.R R/redcap-instruments.R R/redcap-log-read.R R/redcap-metadata-coltypes.R R/redcap-metadata-read.R R/redcap-metadata-write.R R/redcap-next-free-record-name.R R/redcap-project-info-read.R R/redcap-project.R R/redcap-read-eav-oneshot.R R/redcap-read-oneshot-eav.R R/redcap-read-oneshot.R R/redcap-read.R R/redcap-report.R R/redcap-survey-link-export-oneshot.R R/redcap-users-export.R R/redcap-variables.R R/redcap-version.R R/redcap-write-oneshot.R R/redcap-write.R R/retrieve-credential.R R/sanitize-token.R R/skippers.R R/utilities.R R/validate.R README.md

REDCapR.Rproj

_pkgdown.yml

codecov.yml

cran-comments.md documentation-for-developers/first-time-setup.md documentation-for-developers/loose-notes.md documentation-for-developers/online-material.md documentation-for-developers/retired-documentation.md

inst/WORDLIST

inst/misc/bad.credentials

inst/misc/conflicting-rows.credentials

inst/misc/example.credentials

inst/misc/out-of-order.credentials

inst/misc/skeleton.credentials

inst/misc/validation-transformation.yml

inst/misc/vignette.css

inst/misc/zero-rows.credentials

inst/test-data/checkboxes-1/data.csv

inst/test-data/checkboxes-1/dictionary.csv

inst/test-data/checkboxes-1/project.xml

inst/test-data/decimal-comma-and-dot/data.csv

inst/test-data/decimal-comma-and-dot/dictionary.csv

inst/test-data/decimal-comma-and-dot/metadata.csv

inst/test-data/decimal-comma-and-dot/redcapr-specific/default-mismatched.R

inst/test-data/decimal-comma/data.csv

inst/test-data/decimal-comma/dictionary.csv

inst/test-data/decimal-comma/redcapr-specific/default-mismatched.R inst/test-data/decimal-comma/redcapr-specific/set-locale.R

inst/test-data/decimal-dot/data.csv

inst/test-data/decimal-dot/dictionary.csv

inst/test-data/decimal-dot/redcapr-specific/set-locale.R

inst/test-data/delete-multiple-arm/arm.csv

inst/test-data/delete-multiple-arm/data.csv

inst/test-data/delete-multiple-arm/event.csv

inst/test-data/delete-single-arm/data.csv

inst/test-data/levon-and-barry.jpg

inst/test-data/longitudinal-single-arm/arm.csv

inst/test-data/longitudinal-single-arm/data.csv

inst/test-data/longitudinal-single-arm/dictionary.csv

inst/test-data/longitudinal-single-arm/event.csv

inst/test-data/longitudinal-single-arm/project.xml

inst/test-data/mugshot-1.jpg

inst/test-data/mugshot-2.jpg

inst/test-data/mugshot-3.jpg

inst/test-data/mugshot-4.jpg

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inst/test-data/problematic-dictionary/dictionary.csv

inst/test-data/problematic-values/data.csv

inst/test-data/problematic-values/dictionary.csv

inst/test-data/project-clinical-trial/data.csv

inst/test-data/project-clinical-trial/dictionary.csv

inst/test-data/project-color-boxes/Readme.md

inst/test-data/project-color-boxes/data.csv

inst/test-data/project-color-boxes/dictionary.csv

inst/test-data/project-dag/data.csv

inst/test-data/project-dag/dictionary.csv

inst/test-data/project-longitudinal/arm.csv

inst/test-data/project-longitudinal/data.csv

inst/test-data/project-longitudinal/dictionary.csv

inst/test-data/project-longitudinal/event.csv

inst/test-data/project-longitudinal/expected/default.R

inst/test-data/project-longitudinal/expected/default.rds

inst/test-data/project-longitudinal/expected/dummy.R

inst/test-data/project-longitudinal/expected/dummy.rds

inst/test-data/project-longitudinal/expected/filter-bmi.rds

inst/test-data/project-longitudinal/expected/filter-character.R

inst/test-data/project-longitudinal/expected/filter-email.rds

inst/test-data/project-longitudinal/expected/filter-numeric.R inst/test-data/project-longitudinal/expected/so-example-data-frame-retrieval.R

inst/test-data/project-longitudinal/project.xml

inst/test-data/project-russian/data.csv

inst/test-data/project-simple/data.csv

inst/test-data/project-simple/dictionary.csv

inst/test-data/project-simple/metadata.csv

inst/test-data/project-survey/data.csv

inst/test-data/project-survey/dictionary.csv

inst/test-data/project-survey/expected/default.R

inst/test-data/project-survey/expected/default.rds

inst/test-data/project-survey/expected/dummy.rds

inst/test-data/project-survey/expected/so-example-data-frame-retrieval.R

inst/test-data/repeating-instruments/data.csv

inst/test-data/repeating-instruments/dictionary.csv

inst/test-data/repeating-instruments/project.xml

inst/test-data/specific-redcapr/delete/multiple-arm-four-records.R inst/test-data/specific-redcapr/delete/single-arm-four-records.R inst/test-data/specific-redcapr/event-instruments/1-arm.R inst/test-data/specific-redcapr/event-instruments/2-arms-retrieve-both-arms.R inst/test-data/specific-redcapr/event-instruments/2-arms-retrieve-only-arm-1.R inst/test-data/specific-redcapr/event-instruments/2-arms-retrieve-only-arm-2.R inst/test-data/specific-redcapr/event-instruments/no-arms.R inst/test-data/specific-redcapr/instruments/default.R inst/test-data/specific-redcapr/log-read/2020-08-10.R inst/test-data/specific-redcapr/log-read/2021-07-11-record3-user.R inst/test-data/specific-redcapr/metadata-coltypes/longitudinal.R inst/test-data/specific-redcapr/metadata-coltypes/problematic-dictionary.R inst/test-data/specific-redcapr/metadata-coltypes/repeating-instruments.R inst/test-data/specific-redcapr/metadata-coltypes/simple.R inst/test-data/specific-redcapr/metadata-coltypes/validation-types.R inst/test-data/specific-redcapr/metadata-read/normal-filter-form-all-three.R inst/test-data/specific-redcapr/metadata-read/normal-filter-form-demographics.R inst/test-data/specific-redcapr/metadata-read/normal-filter-form-health.R inst/test-data/specific-redcapr/metadata-read/normal-filter-form-race_and_ethnicity.R inst/test-data/specific-redcapr/metadata-read/normal.R inst/test-data/specific-redcapr/metadata-read/super-wide-3-subset.R inst/test-data/specific-redcapr/project-info-read/all-test-projects.R inst/test-data/specific-redcapr/project-info-read/chicago.R inst/test-data/specific-redcapr/project-info-read/simple.R inst/test-data/specific-redcapr/read-batch-plumbing/longitudinal.R inst/test-data/specific-redcapr/read-batch-plumbing/repeated.R inst/test-data/specific-redcapr/read-batch-plumbing/simple.R inst/test-data/specific-redcapr/read-batch-repeating-sparse/default.R inst/test-data/specific-redcapr/read-batch-simple/blank-for-gray-false.R inst/test-data/specific-redcapr/read-batch-simple/blank-for-gray-true.R inst/test-data/specific-redcapr/read-batch-simple/col_types.R inst/test-data/specific-redcapr/read-batch-simple/default.R inst/test-data/specific-redcapr/read-batch-simple/error-bad-token.R inst/test-data/specific-redcapr/read-batch-simple/export_checkbox_label.R inst/test-data/specific-redcapr/read-batch-simple/filter-character.R inst/test-data/specific-redcapr/read-batch-simple/filter-numeric.R inst/test-data/specific-redcapr/read-batch-simple/label-and-dag-one-single-batch.R inst/test-data/specific-redcapr/read-batch-simple/label-and-dag-three-tiny-batches.R inst/test-data/specific-redcapr/read-batch-simple/label-header.R inst/test-data/specific-redcapr/read-batch-simple/label.R inst/test-data/specific-redcapr/read-batch-simple/raw-and-dag.R inst/test-data/specific-redcapr/read-batch-simple/raw.R inst/test-data/specific-redcapr/read-batch-simple/specify-fields-without-record-id.R inst/test-data/specific-redcapr/read-batch-simple/specify-fields-zero-length.R inst/test-data/specific-redcapr/read-batch-simple/specify-fields.R inst/test-data/specific-redcapr/read-batch-simple/specify-forms-only-1st.R inst/test-data/specific-redcapr/read-batch-simple/specify-forms-without-record-id.R inst/test-data/specific-redcapr/read-batch-simple/specify-forms.R inst/test-data/specific-redcapr/read-batch-simple/specify-records-zero-length.R inst/test-data/specific-redcapr/read-batch-simple/specify-records.R inst/test-data/specific-redcapr/read-clinical-trial/default.R inst/test-data/specific-redcapr/read-dag/assigned-to-dag-a.R inst/test-data/specific-redcapr/read-dag/no-assignment.R inst/test-data/specific-redcapr/read-eav-oneshot/blank-for-gray-false.R inst/test-data/specific-redcapr/read-eav-oneshot/blank-for-gray-true.R inst/test-data/specific-redcapr/read-eav-oneshot/default.R inst/test-data/specific-redcapr/read-eav-oneshot/filter-character.R inst/test-data/specific-redcapr/read-eav-oneshot/filter-numeric.R inst/test-data/specific-redcapr/read-eav-oneshot/specify-fields-zero-length.R inst/test-data/specific-redcapr/read-eav-oneshot/specify-fields.R inst/test-data/specific-redcapr/read-eav-oneshot/specify-forms.R inst/test-data/specific-redcapr/read-eav-oneshot/specify-records-zero-length.R inst/test-data/specific-redcapr/read-eav-oneshot/specify-records.R inst/test-data/specific-redcapr/read-oneshot-eav/blank-for-gray-false.R inst/test-data/specific-redcapr/read-oneshot-eav/blank-for-gray-true.R inst/test-data/specific-redcapr/read-oneshot-eav/default.R inst/test-data/specific-redcapr/read-oneshot-eav/filter-character.R inst/test-data/specific-redcapr/read-oneshot-eav/filter-numeric.R inst/test-data/specific-redcapr/read-oneshot-eav/label-and-dag.R inst/test-data/specific-redcapr/read-oneshot-eav/label-header.R inst/test-data/specific-redcapr/read-oneshot-eav/raw-and-dag.R inst/test-data/specific-redcapr/read-oneshot-eav/raw.R inst/test-data/specific-redcapr/read-oneshot-eav/specify-forms.R inst/test-data/specific-redcapr/read-oneshot/blank-for-gray-false.R inst/test-data/specific-redcapr/read-oneshot/blank-for-gray-true.R inst/test-data/specific-redcapr/read-oneshot/col_types.R inst/test-data/specific-redcapr/read-oneshot/default.R inst/test-data/specific-redcapr/read-oneshot/export_checkbox_label.R inst/test-data/specific-redcapr/read-oneshot/filter-character.R inst/test-data/specific-redcapr/read-oneshot/filter-numeric.R inst/test-data/specific-redcapr/read-oneshot/force-character-type.R inst/test-data/specific-redcapr/read-oneshot/label-and-dag.R inst/test-data/specific-redcapr/read-oneshot/label-header.R inst/test-data/specific-redcapr/read-oneshot/label.R inst/test-data/specific-redcapr/read-oneshot/raw-and-dag.R inst/test-data/specific-redcapr/read-oneshot/raw.R inst/test-data/specific-redcapr/read-oneshot/specify-fields-without-record-id.R inst/test-data/specific-redcapr/read-oneshot/specify-fields-zero-length.R inst/test-data/specific-redcapr/read-oneshot/specify-fields.R inst/test-data/specific-redcapr/read-oneshot/specify-forms-only-1st.R inst/test-data/specific-redcapr/read-oneshot/specify-forms-only-2nd.R inst/test-data/specific-redcapr/read-oneshot/specify-forms-without-record-id.R inst/test-data/specific-redcapr/read-oneshot/specify-forms.R inst/test-data/specific-redcapr/read-oneshot/specify-records-zero-length.R inst/test-data/specific-redcapr/read-oneshot/specify-records.R inst/test-data/specific-redcapr/report/col_types.R inst/test-data/specific-redcapr/report/default.R inst/test-data/specific-redcapr/report/export_checkbox_label.R inst/test-data/specific-redcapr/report/force-character-type.R inst/test-data/specific-redcapr/report/label-header.R inst/test-data/specific-redcapr/report/raw.R inst/test-data/specific-redcapr/test-project/read-insert-and-update.R inst/test-data/specific-redcapr/users-export/with-dags--user.R inst/test-data/specific-redcapr/users-export/with-dags--user_form.R inst/test-data/specific-redcapr/users-export/without-dags--user.R inst/test-data/specific-redcapr/users-export/without-dags--user_form.R inst/test-data/specific-redcapr/variables/default.R inst/test-data/specific-redcapr/write-batch/default.R inst/test-data/specific-redcapr/write-batch/update-one-field.R inst/test-data/specific-redcapr/write-batch/update-two-fields.R inst/test-data/specific-redcapr/write-dag/after.R inst/test-data/specific-redcapr/write-dag/before.R inst/test-data/specific-redcapr/write-oneshot/default.R inst/test-data/specific-redcapr/write-oneshot/one-field.R inst/test-data/specific-redcapr/write-oneshot/overwrite-true.R inst/test-data/specific-redcapr/write-oneshot/two-fields.R inst/test-data/super-wide-3/generate-dictionary.R

inst/test-data/super-wide-3/super-wide-3-dictionary.tar.xz

inst/test-data/super-wide-metadata/super-wide-metadata-dictionary.zip

inst/test-data/super-wide/data.csv

inst/test-data/super-wide/dictionary.csv

inst/test-data/validation-types-v1/data.csv

inst/test-data/validation-types-v1/dictionary.csv

inst/test-data/vignette-repeating/data.csv

inst/test-data/vignette-repeating/dictionary.csv

man/REDCapR-package.Rd man/collapse_vector.Rd man/constant.Rd man/create_batch_glossary.Rd

man/figures/logo.png

man/figures/logo.svg

man/kernel_api.Rd man/metadata_utilities.Rd man/redcap_arm_export.Rd man/redcap_column_sanitize.Rd man/redcap_dag_read.Rd man/redcap_delete.Rd man/redcap_event_instruments.Rd man/redcap_event_read.Rd man/redcap_file_download_oneshot.Rd man/redcap_file_upload_oneshot.Rd man/redcap_instrument_download.Rd man/redcap_instruments.Rd man/redcap_log_read.Rd man/redcap_metadata_coltypes.Rd man/redcap_metadata_read.Rd man/redcap_metadata_write.Rd man/redcap_next_free_record_name.Rd man/redcap_project.Rd man/redcap_project_info_read.Rd man/redcap_read.Rd man/redcap_read_eav_oneshot.Rd man/redcap_read_oneshot.Rd man/redcap_read_oneshot_eav.Rd man/redcap_report.Rd man/redcap_survey_link_export_oneshot.Rd man/redcap_users_export.Rd man/redcap_variables.Rd man/redcap_version.Rd man/redcap_write.Rd man/redcap_write_oneshot.Rd man/replace_nas_with_explicit.Rd man/retrieve_credential.Rd man/sanitize_token.Rd man/to_api_array.Rd man/validate.Rd

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playgrounds/Breaking_batch.R playgrounds/HttrPlayground.R playgrounds/LinuxPlayground.R playgrounds/MetadataPlayground.R playgrounds/ParameterizedQueryPlayground.R playgrounds/PlaygroundColumnSanitize.R playgrounds/ReadWithCert.R playgrounds/SSL3Playground.R playgrounds/Validation.R playgrounds/cron-trigger-hack.R playgrounds/decimal-comma.R playgrounds/eav-playground-2.R playgrounds/eav-playground.R playgrounds/local-token.R playgrounds/metadata-2.R playgrounds/metadata-reflect-coltypes.R

playgrounds/python_example.py

playgrounds/retired/retrieve-token.R playgrounds/retired/test-retrieve-token.R playgrounds/ssl_playground.R

revdep/.gitignore

revdep/README.md revdep/cran.md

revdep/email.yml

revdep/failures.md revdep/problems.md tests/manual/README.md tests/manual/test-could-not-connect-rate.R tests/manual/test-stress-test-serial.R tests/spelling.R tests/test-all.R tests/testthat/test-arm-export.R tests/testthat/test-column-sanitize.R tests/testthat/test-constant.R tests/testthat/test-create-batch-glossary.R tests/testthat/test-create-credential-local.R tests/testthat/test-dag-read.R tests/testthat/test-delete.R tests/testthat/test-event-instruments.R tests/testthat/test-event-read.R tests/testthat/test-file-oneshot.R tests/testthat/test-instruments-metadata.R tests/testthat/test-instruments.R tests/testthat/test-log-read.R tests/testthat/test-metadata-coltypes.R tests/testthat/test-metadata-read.R tests/testthat/test-metadata-utilities.R tests/testthat/test-metadata-write.R tests/testthat/test-next-free-record-name.R tests/testthat/test-project-info-read.R tests/testthat/test-project.R tests/testthat/test-read-batch-longitudinal.R tests/testthat/test-read-batch-plumbing.R tests/testthat/test-read-batch-repeating-sparse.R tests/testthat/test-read-batch-simple.R tests/testthat/test-read-batch-survey.R tests/testthat/test-read-clinical-trial.R tests/testthat/test-read-dag.R tests/testthat/test-read-decimal-comma.R tests/testthat/test-read-decimal-dot.R tests/testthat/test-read-eav-oneshot.R tests/testthat/test-read-errors.R tests/testthat/test-read-oneshot-eav.R tests/testthat/test-read-oneshot.R tests/testthat/test-read-russian.R tests/testthat/test-read-superwide.R tests/testthat/test-report.R tests/testthat/test-retrieve-credential-local.R tests/testthat/test-retrieve-credential-mssql.R tests/testthat/test-sanitize.R tests/testthat/test-skippers.R tests/testthat/test-survey-link-export-oneshot.R tests/testthat/test-users-export.R tests/testthat/test-utilities-collapse_vector.R tests/testthat/test-utilities-replace_nas_with_explicit.R tests/testthat/test-validate-field-names.R tests/testthat/test-validate-no-logical.R tests/testthat/test-validate-record-id-name.R tests/testthat/test-validate-repeat.R tests/testthat/test-validate-uniqueness.R tests/testthat/test-validate.R tests/testthat/test-variables.R tests/testthat/test-version.R tests/testthat/test-write-batch.R tests/testthat/test-write-dag.R tests/testthat/test-write-error.R tests/testthat/test-write-oneshot.R utility/install-packages.R

utility/package-dependency-list.csv

utility/plugins/wipe-project-dag.php

utility/plugins/wipe-project-delete-multiple-arm.php

utility/plugins/wipe-project-delete-single-arm.php

utility/plugins/wipe-project-simple.php

utility/refresh.R

utility/test-project-metadata/redcapr-target-simple-data.csv

utility/test-project-metadata/redcapr-target-simple.csv

utility/test-project-metadata/seed-project-simple.txt

vignettes/BasicREDCapROperations.Rmd vignettes/SecurityDatabase.Rmd vignettes/TroubleshootingApiCalls.Rmd vignettes/advanced-redcapr-operations.Rmd

vignettes/images/ApiPrivilegeDashboard.png

vignettes/images/EmailVerified.png

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vignettes/longitudinal-and-repeating.Rmd vignettes/workflow-read.Rmd vignettes/workflow-write.Rmd

OuhscBbmc/REDCapR documentation built on Jan. 31, 2024, 8:30 p.m.