API for Oyserman/ctr
Congruent Transcriptional Response

Global functions
Calc_Ave_Attribute_Completion Man page Source code
Calc_Jaccard Man page Source code
Calc_Jaccard_dist Man page Source code
Calc_KO_presence_absence Man page Source code
Calc_NRED_dist Man page Source code
Calc_Norm_Euc Man page Source code
Calc_P_NRED_dist Man page Source code
Calc_P_dist Man page Source code
Calc_Pairwise_KOs_Dist Man page Source code
Calc_Z_scores Man page Source code
Calc_ave_Z_score Man page Source code
Calc_cor_matrix Man page Source code
Calc_cor_matrix_C Source code
Calc_ind_KOs_bkgd_dist Man page Source code
Calc_module_bkgd_dist Man page Source code
Calc_module_completion Man page Source code
Calc_row Source code
Calc_top_redundant_modules Source code
Calc_top_redundant_traits Source code
Cluster_attributes Man page Source code
Cluster_prune Man page Source code
Create_Rank_Columns Man page Source code
Draw_Network Source code
Fill_attribute_matrix Man page Source code
General_features-class Man page
Generate_Random_Module Man page Source code
GetFeatures Source code
Make_module_lists Man page Source code
Normalize Man page Source code
Normalize_by_bin Source code
Pairwise_KOs_Calculation Man page Source code
Parse_ruleframe Source code
Plot_trait_attributes Source code
RandomDistances Source code
Remove_sd_zero Man page Source code
array_fig Man page Source code
cluster_info Source code
comb Source code
comparePairwise Source code
comparePairwise_C Source code
defaultRNA_Normalize Source code
edgeRmethods Source code
getPathwayName Source code
plot_ind_bkgd Man page Source code
sample_KO Source code
which_rows_with_no_sd_cpp Source code
Oyserman/ctr documentation built on Oct. 4, 2017, 12:06 a.m.