| .bdem.median.set |
Source code
|
| .bdem.median.shift |
Source code
|
| .cleanup.mcmc |
Source code
|
| .combine.diagnosis |
Source code
|
| .combine.lists |
Source code
|
| .combine.na.table |
Source code
|
| .do.diagnose |
Source code
|
| .do.get.convergence.all |
Source code
|
| .do.get.traces |
Source code
|
| .do.gvis.bdem.map |
Source code
|
| .do.plot.all |
Source code
|
| .do.plot.all.country.loop |
Source code
|
| .do.shift.prediction.to.wpp |
Source code
|
| .doGoF.dl |
Source code
|
| .extra.matrix.regions |
Source code
|
| .find.burnin.nr.traj.from.diag |
Source code
|
| .get.T.start.end |
Source code
|
| .get.backtransformed.Triangles |
Source code
|
| .get.compression.settings |
Source code
|
| .get.compression.settings.obsolete |
Source code
|
| .get.gamma.pars |
Man page
|
| .get.gamma.pars.bayesTFR.prediction |
Source code
|
| .get.ltrunc.condition |
Source code
|
| .get.model.est |
Source code
|
| .get.suppl.data.list |
Source code
|
| .get.suppl.matrix.and.regions |
Source code
|
| .get.trajectories.table |
Source code
|
| .get.trunc.condition |
Source code
|
| .impute.prop.cov.gamma |
Source code
|
| .map.main.default |
Man page
|
| .map.main.default.bayesTFR.prediction |
Source code
|
| .match.colors.with.default |
Source code
|
| .prepare.country.spec.pars.for.predictions |
Source code
|
| .summary.mcmc.set.phaseII |
Source code
|
| .summary.mcmc.set.phaseIII |
Source code
|
| .update.meta.for.thinned.mcmc |
Source code
|
| .update.summary.data.by.shift |
Source code
|
| DLcurve |
Man page
Source code
|
| DLcurve.plot |
Man page
|
| DLcurve.plot.all |
Man page
|
| UN_time |
Man page
|
| UN_variants |
Man page
|
| add.iso |
Source code
|
| average.trajectories |
Source code
|
| bDem.performParallel |
Source code
|
| bayesTFR |
Man page
|
| bayesTFR-package |
Man page
|
| bayesTFR.convergence |
Man page
|
| bayesTFR.mcmc |
Man page
|
| bayesTFR.mcmc.meta |
Man page
|
| bayesTFR.mcmc.set |
Man page
|
| bayesTFR.prediction |
Man page
|
| bdem.map.all |
Source code
|
| bdem.map.gvis |
Man page
|
| bdem.map.gvis.bayesTFR.prediction |
Source code
|
| bdem.parameter.traces |
Man page
|
| bdem.parameter.traces.bayesTFR.mcmc |
Source code
|
| burn.and.thin |
Man page
Source code
|
| chain.info |
Source code
|
| coda.list.mcmc |
Man page
Source code
|
| coda.list.mcmc3 |
Man page
Source code
|
| coda.mcmc |
Man page
|
| coda.mcmc.bayesTFR.mcmc |
Man page
Source code
|
| continue.tfr.mcmc |
Man page
Source code
|
| continue.tfr3.mcmc |
Man page
Source code
|
| convert.tfr.trajectories |
Man page
Source code
|
| correlation_predictors |
Man page
|
| country.names |
Man page
Source code
|
| create.sublocation.dataset |
Source code
|
| create.thinned.tfr.mcmc |
Man page
Source code
|
| diag.thin.indep |
Man page
Source code
|
| dnorm.trunc |
Source code
|
| do.convert.trajectories |
Man page
Source code
|
| do.get.tfr.parameter.traces |
Man page
Source code
|
| do.get.traces |
Man page
|
| do.get.traces.bayesTFR.mcmc |
Man page
|
| do.meta.ini |
Man page
Source code
|
| do.meta.ini.subnat |
Source code
|
| do.plot.tfr.pardensity |
Man page
Source code
|
| do.plot.tfr.partraces |
Man page
Source code
|
| do.read.subnat.file |
Source code
|
| do.read.un.file |
Man page
Source code
|
| do.write.parameters.summary |
Source code
|
| do.write.projection.summary |
Man page
Source code
|
| do.write.values.into.file |
Man page
Source code
|
| estimate.bias.sd.original |
Source code
|
| estimate.bias.sd.raw |
Source code
|
| extract.plot.args |
Man page
Source code
|
| fastdmvnorm |
Source code
|
| filter.traces |
Man page
Source code
|
| find.lambda.for.one.country |
Source code
|
| find.raw.data.outliers |
Source code
|
| find.tau.and.DLcountries |
Man page
|
| find.tau.lambda.and.DLcountries |
Source code
|
| get.TFRmatrix.and.regions |
Man page
Source code
|
| get.UN.variant.names |
Man page
|
| get.UN.variant.names.bayesTFR.prediction |
Source code
|
| get.all.parameter.names |
Man page
Source code
|
| get.all.parameter.names.cs |
Man page
Source code
|
| get.all.parameter.names.extended |
Man page
Source code
|
| get.all.prediction.years |
Source code
|
| get.ar1.countries |
Man page
Source code
|
| get.ar1.countries.index |
Man page
Source code
|
| get.ar1.data |
Man page
Source code
|
| get.ar1.parameters |
Man page
Source code
|
| get.backtrans.parameter.names |
Source code
|
| get.bias.model |
Man page
Source code
|
| get.burned.tfr.traces |
Man page
Source code
|
| get.burnin.nrtraj.from.diagnostics |
Source code
|
| get.countries.index |
Man page
|
| get.countries.index.bayesTFR.mcmc.meta |
Source code
|
| get.countries.phase |
Man page
|
| get.countries.phase.bayesTFR.mcmc.set |
Man page
Source code
|
| get.countries.phase.bayesTFR.prediction |
Man page
Source code
|
| get.countries.table |
Man page
|
| get.countries.table.bayesTFR.mcmc.set |
Man page
Source code
|
| get.countries.table.bayesTFR.prediction |
Man page
Source code
|
| get.country.object |
Man page
Source code
|
| get.cov.gammas |
Man page
Source code
|
| get.data.for.country.imputed |
Man page
|
| get.data.for.country.imputed.bayesTFR.prediction |
Source code
|
| get.data.for.worldmap |
Man page
|
| get.data.for.worldmap.bayesTFR.prediction |
Man page
Source code
|
| get.data.imputed |
Man page
|
| get.data.imputed.bayesTFR.prediction |
Source code
|
| get.data.matrix |
Man page
|
| get.data.matrix.bayesTFR.mcmc.meta |
Source code
|
| get.eps.all.phases |
Source code
|
| get.estimation.year.index |
Source code
|
| get.estimation.years |
Source code
|
| get.friendly.variant.names |
Man page
|
| get.friendly.variant.names.bayesTFR.prediction |
Source code
|
| get.full.par.names |
Man page
Source code
|
| get.full.par.names.cs |
Man page
Source code
|
| get.half.child.variant |
Man page
Source code
|
| get.item |
Source code
|
| get.lambda |
Man page
|
| get.log.lik.raw |
Source code
|
| get.log.lik.year |
Source code
|
| get.mcmc.list |
Man page
|
| get.mcmc.list.bayesTFR.mcmc |
Man page
Source code
|
| get.mcmc.list.bayesTFR.mcmc.set |
Man page
Source code
|
| get.mcmc.list.bayesTFR.prediction |
Man page
Source code
|
| get.mcmc.list.list |
Man page
Source code
|
| get.mcmc.meta |
Man page
|
| get.mcmc.meta.bayesTFR.mcmc |
Source code
|
| get.mcmc.meta.bayesTFR.mcmc.meta |
Source code
|
| get.mcmc.meta.bayesTFR.mcmc.set |
Source code
|
| get.mcmc.meta.bayesTFR.prediction |
Source code
|
| get.median.from.prediction |
Man page
Source code
|
| get.meta.only |
Man page
|
| get.newTFRcolnames |
Man page
|
| get.nr.countries |
Man page
|
| get.nr.countries.bayesTFR.mcmc.meta |
Source code
|
| get.nrest.countries |
Man page
|
| get.nrest.countries.bayesTFR.mcmc.meta |
Source code
|
| get.obs.estimate.diff |
Source code
|
| get.obs.estimate.diff.original |
Source code
|
| get.observed.tfr |
Source code
|
| get.observed.time.matrix.and.regions |
Man page
Source code
|
| get.observed.with.supplemental |
Source code
|
| get.other.parameter.names |
Man page
Source code
|
| get.other.parameter.names.cs |
Man page
|
| get.predORest.year.index |
Source code
|
| get.prediction.periods |
Man page
Source code
|
| get.prediction.summary.data |
Source code
|
| get.prediction.year.index |
Source code
|
| get.prediction.years |
Man page
Source code
|
| get.projection.summary.header |
Man page
|
| get.projection.summary.header.bayesTFR.prediction |
Source code
|
| get.quantile.from.prediction |
Source code
|
| get.regtfr.prediction |
Man page
Source code
|
| get.sd.all.phases |
Source code
|
| get.std.model |
Man page
Source code
|
| get.stored.mcmc.length |
Man page
Source code
|
| get.stored.mcmc.length.extra |
Source code
|
| get.tfr.convergence |
Man page
Source code
|
| get.tfr.convergence.all |
Man page
Source code
|
| get.tfr.estimation |
Man page
Source code
|
| get.tfr.map.parameters |
Man page
Source code
|
| get.tfr.mcmc |
Man page
Source code
|
| get.tfr.parameter.traces |
Man page
Source code
|
| get.tfr.parameter.traces.cs |
Man page
Source code
|
| get.tfr.periods |
Source code
|
| get.tfr.prediction |
Man page
Source code
|
| get.tfr.reconstructed |
Man page
Source code
|
| get.tfr.shift |
Man page
Source code
|
| get.tfr.shift.all |
Source code
|
| get.tfr.shift.estimation |
Man page
Source code
|
| get.tfr.trajectories |
Man page
Source code
|
| get.tfr3.convergence |
Man page
Source code
|
| get.tfr3.convergence.all |
Man page
Source code
|
| get.tfr3.mcmc |
Man page
Source code
|
| get.tfr3.parameter.traces |
Man page
Source code
|
| get.tfr3.parameter.traces.cs |
Man page
Source code
|
| get.thinned.burnin |
Man page
Source code
|
| get.thinned.tfr.mcmc |
Man page
Source code
|
| get.thinning.index |
Man page
Source code
|
| get.tobacktrans.parameter.names |
Source code
|
| get.total.iterations |
Man page
Source code
|
| get.totrans.parameter.names |
Man page
Source code
|
| get.totrans.parameter.names.cs |
Man page
|
| get.traj.ascii.header |
Man page
|
| get.traj.ascii.header.bayesTFR.mcmc.meta |
Source code
|
| get.traj.quantiles |
Man page
Source code
|
| get.trajectories |
Man page
Source code
|
| get.trans.parameter.names |
Man page
Source code
|
| get.trans.parameter.names.cs |
Man page
|
| get.typical.trajectory.index |
Source code
|
| get.wpp.revision.number |
Source code
|
| getValue |
Source code
|
| get_eps_T |
Man page
|
| get_eps_T_all |
Man page
|
| has.est.uncertainty |
Source code
|
| has.mcmc.converged |
Man page
Source code
|
| has.tfr.mcmc |
Man page
Source code
|
| has.tfr.prediction |
Man page
Source code
|
| has.tfr3.mcmc |
Man page
Source code
|
| include |
Man page
|
| include_2010 |
Man page
|
| include_2012 |
Man page
|
| include_2015 |
Man page
|
| include_2017 |
Man page
|
| include_2019 |
Man page
|
| include_2022 |
Man page
|
| ini.tfr.with.DL |
Man page
|
| init.nodes |
Man page
Source code
|
| init.nodes.cont |
Man page
|
| interpolate.trajectories |
Source code
|
| is.cor.positive.definite |
Source code
|
| is.missing |
Source code
|
| iso3166 |
Man page
|
| load.bdem.dataset |
Source code
|
| load.from.wpp |
Source code
|
| load.tfr.parameter.traces |
Man page
Source code
|
| load.tfr.parameter.traces.all |
Man page
Source code
|
| load.tfr.parameter.traces.cs |
Man page
Source code
|
| load.tfr3.parameter.traces |
Source code
|
| load.tfr3.parameter.traces.all |
Source code
|
| load.tfr3.parameter.traces.cs |
Source code
|
| log_cond_Triangle_c4_trans |
Man page
|
| log_cond_U |
Man page
Source code
|
| log_cond_abf_sd |
Man page
|
| log_cond_const_sd |
Man page
|
| log_cond_d_trans |
Man page
Source code
|
| log_cond_sigma0 |
Man page
|
| log_cond_sigma0.tau |
Man page
Source code
|
| log_like_gammas |
Man page
Source code
|
| logdensity.mu.rho |
Source code
|
| logdensity.sigma.mu.rho |
Source code
|
| make.tfr.prediction |
Man page
Source code
|
| mcmc.continue.chain |
Man page
Source code
|
| mcmc.ini |
Man page
Source code
|
| mcmc.ini.extra |
Man page
Source code
|
| mcmc.meta.ini |
Man page
Source code
|
| mcmc.meta.ini.extra |
Man page
Source code
|
| mcmc.meta.ini.subnat |
Source code
|
| mcmc.run.chain |
Man page
Source code
|
| mcmc.run.chain.extra |
Man page
Source code
|
| mcmc.update.Triangle_c4 |
Man page
Source code
|
| mcmc.update.U |
Man page
Source code
|
| mcmc.update.abS |
Man page
Source code
|
| mcmc.update.abSsigma0const |
Man page
Source code
|
| mcmc.update.d |
Man page
Source code
|
| mcmc.update.gamma |
Man page
Source code
|
| mcmc.update.rho.phase2 |
Source code
|
| mcmc.update.sigma0.tau |
Man page
|
| mcmc.update.sigma0const |
Man page
Source code
|
| mcmc.update.tfr |
Source code
|
| mcmc.update.tfr.year |
Source code
|
| mcmc3.continue.chain |
Source code
|
| mcmc3.ini |
Source code
|
| mcmc3.run.chain |
Source code
|
| mu.rho.integral |
Source code
|
| newPointer |
Source code
|
| no.traces.loaded |
Man page
Source code
|
| one.step.mcmc3.sampling |
Source code
Source code
|
| overwrite.colnames |
Man page
|
| par.names.for.worldmap |
Man page
Source code
|
| par.names.for.worldmap.bayesTFR.prediction |
Source code
|
| print.bayesTFR.convergence |
Source code
|
| print.bayesTFR.estimation |
Source code
|
| print.bayesTFR.mcmc |
Source code
|
| print.bayesTFR.mcmc.meta |
Source code
|
| print.bayesTFR.mcmc.set |
Source code
|
| print.bayesTFR.prediction |
Source code
|
| print.summary.bayesTFR.convergence |
Source code
|
| print.summary.bayesTFR.mcmc |
Source code
|
| print.summary.bayesTFR.mcmc.meta |
Source code
|
| print.summary.bayesTFR.mcmc.set |
Man page
Source code
|
| print.summary.bayesTFR.mcmc.set.meta |
Man page
|
| print.summary.bayesTFR.prediction |
Man page
Source code
|
| print.summary.chain.info |
Source code
|
| process.not.converged.parameters |
Man page
Source code
|
| proposal.mu.rho |
Source code
|
| proposal_cov_gammas_cii |
Man page
|
| rawTFR |
Man page
|
| read.UNlocations |
Man page
Source code
|
| read.UNtfr |
Man page
Source code
|
| read.tfr.file |
Man page
Source code
|
| remove.tfr.traces |
Man page
Source code
|
| rgamma.trunc |
Source code
|
| rnorm.trunc |
Source code
|
| run.tfr.mcmc |
Man page
Source code
|
| run.tfr.mcmc.extra |
Man page
Source code
|
| run.tfr3.mcmc |
Man page
Source code
|
| set.default.cltype |
Source code
|
| set.wpp.extra |
Man page
Source code
|
| set.wpp.subnat |
Source code
|
| set_wpp_regions |
Man page
Source code
|
| slice.sampling |
Source code
|
| stop.if.country.not.DL |
Man page
Source code
|
| stop.if.mcmc.missing |
Source code
|
| store.bayesTFR.convergence |
Source code
|
| store.bayesTFR.meta.object |
Man page
Source code
|
| store.bayesTFR.object |
Man page
Source code
|
| store.bayesTFR.prediction |
Source code
|
| store.mcmc |
Man page
|
| store.traj.ascii |
Man page
Source code
|
| summary.bayesTFR.convergence |
Man page
Source code
|
| summary.bayesTFR.mcmc |
Man page
Source code
|
| summary.bayesTFR.mcmc.meta |
Source code
|
| summary.bayesTFR.mcmc.set |
Man page
Source code
|
| summary.bayesTFR.prediction |
Man page
Source code
|
| tfr.DLisDecrement |
Source code
|
| tfr.bias.sd |
Man page
Source code
|
| tfr.correlation |
Source code
|
| tfr.country.dlcurves |
Man page
Source code
|
| tfr.diagnose |
Man page
Source code
|
| tfr.dl.coverage |
Man page
Source code
|
| tfr.estimation.plot |
Man page
Source code
|
| tfr.get.dlcurves |
Man page
Source code
|
| tfr.ggmap |
Man page
Source code
|
| tfr.identical |
Man page
Source code
|
| tfr.info |
Man page
Source code
|
| tfr.map |
Man page
Source code
|
| tfr.map.all |
Man page
Source code
|
| tfr.map.gvis |
Man page
Source code
|
| tfr.mcmc |
Man page
Source code
|
| tfr.mcmc.list |
Man page
Source code
|
| tfr.mcmc.sampling |
Man page
Source code
|
| tfr.mcmc.sampling.extra |
Man page
Source code
|
| tfr.median.adjust |
Man page
Source code
|
| tfr.median.reset |
Man page
Source code
|
| tfr.median.reset.estimation |
Man page
Source code
|
| tfr.median.set |
Man page
Source code
|
| tfr.median.set.all |
Man page
Source code
|
| tfr.median.shift |
Man page
Source code
|
| tfr.meta.identical |
Source code
|
| tfr.parameter.names |
Man page
Source code
|
| tfr.parameter.names.cs |
Man page
Source code
|
| tfr.parameter.names.cs.extended |
Man page
Source code
|
| tfr.parameter.names.extended |
Man page
Source code
|
| tfr.pardensity.cs.plot |
Man page
Source code
|
| tfr.pardensity.plot |
Man page
Source code
|
| tfr.partraces.cs.plot |
Man page
Source code
|
| tfr.partraces.plot |
Man page
Source code
|
| tfr.predict |
Man page
Source code
|
| tfr.predict.extra |
Man page
Source code
|
| tfr.predict.subnat |
Man page
Source code
|
| tfr.raftery.diag |
Man page
Source code
|
| tfr.set.identical |
Man page
Source code
|
| tfr.shift.estimation.to.wpp |
Man page
Source code
|
| tfr.shift.prediction.to.wpp |
Man page
Source code
|
| tfr.trajectories.plot |
Man page
Source code
|
| tfr.trajectories.plot.all |
Man page
Source code
|
| tfr.trajectories.table |
Man page
Source code
|
| tfr.world.dlcurves |
Man page
Source code
|
| tfr.write.projection.summary.and.parameters |
Source code
|
| tfr3.diagnose |
Man page
Source code
|
| tfr3.mcmc.sampling |
Source code
|
| tfr3.parameter.names |
Man page
Source code
|
| tfr3.parameter.names.cs |
Man page
Source code
|
| tfr3.pardensity.cs.plot |
Man page
Source code
|
| tfr3.pardensity.plot |
Man page
Source code
|
| tfr3.partraces.cs.plot |
Man page
Source code
|
| tfr3.partraces.plot |
Man page
Source code
|
| tfr3.raftery.diag |
Man page
Source code
|
| thinindep |
Man page
Source code
|
| unblock.gtk |
Source code
|
| update.obs.estimate.diff |
Source code
|
| write.list.into.file.cindep |
Source code
|
| write.projection.summary |
Man page
Source code
|
| write.table.into.file.cdep |
Man page
Source code
|
| write.table.into.file.cindep |
Man page
Source code
|
| write.values.into.file.cdep |
Man page
Source code
|
| write.values.into.file.cindep |
Man page
Source code
|
| zero.neg.evals |
Source code
|
