Files in PSC-CoTC/AnnualReport
Writes the Annual Report using a pre and post season FRAM DB.
.Rbuildignore
.gitignore
CotcAnnualReport.Rproj
DESCRIPTION
NAMESPACE
NEWS.md
R/AnnualReportLib.r
R/FramDB.R
R/PscFramAdminData.r
R/TammData.r
R/Util.r
R/createImportFiles.R
R/exportERs.R
R/formatText.R
R/importPostSeasonTemplates.R
R/preseasonExport.R
R/writePostSeasonReport.R
README.md
csv/PSCFisheries.csv
csv/PSCFisheryMap.csv
csv/PSCStockMap.csv
csv/PSCStocks.csv
csv/PersonFramFisheries.csv
csv/PersonFramStocks.csv
csv/TammEscFullRef.csv
csv/TammEscQueetsRef.csv
csv/TammFisheryFullRef.csv
csv/TammFisheryQueetsRef.csv
help/Preseason-export-readme.md
help/annual-report-readme.md
help/export-ERs-readme.md
help/import-file-readme.md
import_templates/AHB_BkCoho18 01_20200330_125249.csv
import_templates/AHB_BkCoho18 01_20200330_130630.csv
import_templates/AHB_BkCoho18 01_20200330_135943.csv
import_templates/AHB_BkCoho18 01_20200401_091621.csv
import_templates/AHB_BkCoho18 01_20200401_103633.csv
import_templates/AHB_BkCoho18 01_20200401_111745.csv
import_templates/ALL_BkCoho18 01_20200330_115311.csv
import_templates/ALL_BkCoho18 01_20200330_120908.csv
import_templates/ALL_BkCoho18 01_20200330_121523.csv
import_templates/ALL_BkCoho18 01_20200330_130620.csv
import_templates/ALL_BkCoho18 01_20200330_135943.csv
import_templates/ALL_BkCoho18 01_20200401_091621.csv
import_templates/ALL_BkCoho18 01_20200401_103633.csv
import_templates/ALL_BkCoho18 01_20200401_111745.csv
import_templates/ALL_bc-Coho1830_20200330_111016.csv
import_templates/ALL_bc-Coho1830_20200330_111623.csv
import_templates/ALL_bc-Coho1830_20200330_112052.csv
import_templates/ALL_bc-Coho1830_20200330_112112.csv
import_templates/CF_BkCoho18 01_20200330_125249.csv
import_templates/CF_BkCoho18 01_20200330_130630.csv
import_templates/CF_BkCoho18 01_20200330_135943.csv
import_templates/CF_BkCoho18 01_20200401_091621.csv
import_templates/CF_BkCoho18 01_20200401_103633.csv
import_templates/CF_BkCoho18 01_20200401_111745.csv
import_templates/CT_BkCoho18 01_20200330_125249.csv
import_templates/CT_BkCoho18 01_20200330_130630.csv
import_templates/CT_BkCoho18 01_20200330_135943.csv
import_templates/CT_BkCoho18 01_20200401_091621.csv
import_templates/CT_BkCoho18 01_20200401_103633.csv
import_templates/CT_BkCoho18 01_20200401_111745.csv
import_templates/DH_BkCoho18 01_20200330_125249.csv
import_templates/DH_BkCoho18 01_20200330_130630.csv
import_templates/DH_BkCoho18 01_20200330_135943.csv
import_templates/DH_BkCoho18 01_20200401_091621.csv
import_templates/DH_BkCoho18 01_20200401_103633.csv
import_templates/DH_BkCoho18 01_20200401_111745.csv
import_templates/JS_BkCoho18 01_20200330_125249.csv
import_templates/JS_BkCoho18 01_20200330_130630.csv
import_templates/JS_BkCoho18 01_20200330_135943.csv
import_templates/JS_BkCoho18 01_20200401_091621.csv
import_templates/JS_BkCoho18 01_20200401_103633.csv
import_templates/JS_BkCoho18 01_20200401_111745.csv
import_templates/ML_BkCoho18 01_20200330_125249.csv
import_templates/ML_BkCoho18 01_20200330_130630.csv
import_templates/ML_BkCoho18 01_20200330_135943.csv
import_templates/ML_BkCoho18 01_20200401_091621.csv
import_templates/ML_BkCoho18 01_20200401_103633.csv
import_templates/ML_BkCoho18 01_20200401_111745.csv
inst/AnnualReport.Rmd
inst/AnnualReportBigBar.Rmd
inst/AnnualReportChunks.R
inst/PSC.png
inst/PreseasonReport_BigBar.Rmd
inst/header.tex
inst/preseasonReport.Rmd
inst/sql/CheckFisheryMsfFlag.sql
inst/sql/DeleteFramBackwardEsc.sql
inst/sql/DeleteFramNonRetention.sql
inst/sql/FisheryMortalities.sql
inst/sql/FramBackwardEscapement.sql
inst/sql/FramFisheries.sql
inst/sql/FramStocks.sql
inst/sql/GetFramFisheryScalars.sql
inst/sql/GetFramRunBaseFisheries.sql
inst/sql/GetFramRunBaseStocks.sql
inst/sql/GetFramSingleBackwardEscapement.sql
inst/sql/GetFramSingleNonRetention.sql
inst/sql/GetFramSingleRecruitScalar.sql
inst/sql/GetFramStockRecruitScalars.sql
inst/sql/InsertFramBackwardEsc.sql
inst/sql/InsertFramNonRetention.sql
inst/sql/RunInfo.sql
inst/sql/RunTable.sql
inst/sql/RunTabletest.sql
inst/sql/TotalEscapement.sql
inst/sql/TotalFisheryMortalities.sql
inst/sql/UpdateFramBackwardEsc.sql
inst/sql/UpdateFramFisheryScalars.sql
inst/sql/UpdateFramNonRetention.sql
inst/sql/UpdateFramStockRecruitScalars.sql
man/BuildFisheryTable.Rd
man/CompilePscData.Rd
man/CreateTable1.Rd
man/CreateTable2.Rd
man/CreateTable3.Rd
man/FisheryMortSqlFilename.Rd
man/FormatDouble.Rd
man/FormatInt.Rd
man/FormatNameIdText.Rd
man/FormatTruncTextSet.Rd
man/FramGetSingleRecruitScalar.Rd
man/GetColumnSums.Rd
man/GetPscEscapement.Rd
man/GetPscMortality.Rd
man/GetPstStockCountryCap.Rd
man/GetPstStockStatusCap.Rd
man/GetTammData.Rd
man/GetTammEscapement.Rd
man/GetTammFisheryMortality.Rd
man/GetTammValues.Rd
man/GetTimeStampText.Rd
man/LoadConfigFiles.Rd
man/LoadSourceFile.Rd
man/ReadCsv.Rd
man/ReadMemoryCsv.Rd
man/RunSqlFile.Rd
man/SummaryRegionTotals.Rd
man/TitleCase.Rd
man/ValidateRunInfo.Rd
man/ValidateValueDomain.Rd
man/WriteCsv.Rd
man/WriteMemoryCsv.Rd
man/WritePSCFramTables.Rd
man/WriteProtectedCsv.Rd
man/checkFramCommentCol.Rd
man/combine_GS_fishery_mortality.Rd
man/combine_GS_stock_summary.Rd
man/createImportFiles.Rd
man/exportFisheryERs.Rd
man/formatHtml.Rd
man/formatPkgTextFile.Rd
man/formatSql.Rd
man/getFramBackwardEscapement.Rd
man/getFramBaseFisheries.Rd
man/getFramBaseStocks.Rd
man/getFramData.Rd
man/getFramFisheries.Rd
man/getFramFisheryMortality.Rd
man/getFramFisheryScalars.Rd
man/getFramRunInfo.Rd
man/getFramRunTable.Rd
man/getFramStockRecruitScalars.Rd
man/getFramStocks.Rd
man/getFramTotalEscapement.Rd
man/getFramTotalFisheryMortality.Rd
man/getPersonFramFisheries.Rd
man/getPersonFramStocks.Rd
man/getPreseasonERs.Rd
man/importFramTemplates.Rd
man/kFramBackwardEscSqlFilename.Rd
man/kFramGetSingleNonRetention.Rd
man/loadPscData.Rd
man/pairEscapementFlags.Rd
man/parseImportFile.Rd
man/postSeasonTable3Summary.Rd
man/updateFisheryScalars.Rd
man/updateTargetEscapement.Rd
man/validEscapementFlags.Rd
man/validFisheries.Rd
man/validMarkInfo.Rd
man/validPostSeasonCatch.Rd
man/validTargetEscapement.Rd
man/writeAnnualReport.Rd
man/writeImportFile.Rd
