analysis/01.SelectGenes/Markers_1.2/comparison_CellTypes-Markers_1.1-Markers_1.2_short.md
In PavlidisLab/neuroExpressoAnalysis: Marker genes of brain cell types and their use in analysis of whole tissue data
| | added| removed| Total genes in final list|
|:----------------------|-----:|-------:|-------------------------:|
|Astrocyte | 26| 18| 428|
|Ependymal | 1| 2| 68|
|Microglia | 38| 38| 845|
|Microglia_activation | 5| 7| 183|
|Microglia_deactivation | 8| 13| 278|
|Noradrenergic | 5| 1| 137|
|Oligo | 21| 18| 438|
|Purkinje | 1| 0| 49|
|Pyramidal | 6| 1| 73|
|ForebrainCholin | 1| 6| 103|
|BrainstemCholin | 2| 0| 41|
|Basket | 1| 0| 8|
|CerebGranule | 1| 0| 13|
|Golgi | 0| 1| 29|
|GabaPV | 2| 0| 32|
|Gluta | 1| 0| 11|
|Endothelial | 8| 8| 191|
|GabaRelnCalb | 1| 1| 24|
|GabaVIPReln | 3| 2| 50|
|OligoPrecursors | 7| 7| 211|
|GabaSSTReln | 0| 2| 53|
|SpinalCordCholinergic | 3| 1| 130|
|Spiny | 1| 0| 75|
|Dopaminergic | 2| 2| 60|
PavlidisLab/neuroExpressoAnalysis documentation built on Aug. 23, 2022, 7:42 a.m.
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| | added| removed| Total genes in final list| |:----------------------|-----:|-------:|-------------------------:| |Astrocyte | 26| 18| 428| |Ependymal | 1| 2| 68| |Microglia | 38| 38| 845| |Microglia_activation | 5| 7| 183| |Microglia_deactivation | 8| 13| 278| |Noradrenergic | 5| 1| 137| |Oligo | 21| 18| 438| |Purkinje | 1| 0| 49| |Pyramidal | 6| 1| 73| |ForebrainCholin | 1| 6| 103| |BrainstemCholin | 2| 0| 41| |Basket | 1| 0| 8| |CerebGranule | 1| 0| 13| |Golgi | 0| 1| 29| |GabaPV | 2| 0| 32| |Gluta | 1| 0| 11| |Endothelial | 8| 8| 191| |GabaRelnCalb | 1| 1| 24| |GabaVIPReln | 3| 2| 50| |OligoPrecursors | 7| 7| 211| |GabaSSTReln | 0| 2| 53| |SpinalCordCholinergic | 3| 1| 130| |Spiny | 1| 0| 75| |Dopaminergic | 2| 2| 60|
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