API for PredictiveEcology/reproducible
A Set of Tools that Enhance Reproducibility Beyond Package Management

Global functions
%<% Man page
%C% Man page
.CacheFn1 Source code
.CachePipeFn1 Source code
.CacheSideEffectFn1 Source code
.CacheSideEffectFn2 Source code
.CacheVerboseFn1 Source code
.addChangedAttr Man page
.addChangedAttr,ANY-method Man page
.addTagsRepo Source code
.addTagsToOutput Man page
.addTagsToOutput,ANY-method Man page
.archiveExtractBinary Man page Source code
.basename Source code
.basenames Source code
.cacheMessage Man page
.cacheMessage,ANY-method Man page
.callArchiveExtractFn Source code
.checkCacheRepo Man page
.checkCacheRepo,ANY-method Man page
.checkDeprecated Source code
.checkForAuxiliaryFiles Man page Source code
.checkForSimilar Source code
.checkFunInDots Source code
.checkGitConfig Man page Source code
.checkLocalSources Source code
.checkSums Source code
.checkSumsUpdate Source code
.compareChecksumsAndFiles Source code
.debugCache Man page Source code
.decodeMagicNumber Source code
.digest Man page
.digest,character-method Man page
.digestRasterLayer Man page Source code
.extractFunction Source code
.findSimilar Source code
.fixNoFileExtension Source code
.fnCleanup Source code
.formalsNotInCurrentDots Man page Source code
.getFromRepo Source code
.getOtherFnNamesAndTags Source code
.getSourceURL Source code
.getTargetCRS Man page Source code
.grepSysCalls Man page Source code
.groupedMessage Source code
.guessAtFile Source code
.guessAtTargetAndFun Man page Source code
.guessFileExtension Source code
.installPackages Man page Source code
.isArchive Source code
.libPathListFiles Source code
.listFilesInArchive Man page Source code
.loadFromLocalRepoMem2 Source code
.messageCacheSize Source code
.objSizeInclEnviros Man page
.objSizeInclEnviros,ANY-method Man page
.objSizeInclEnviros,environment-method Man page
.onAttach Source code
.onLoad Source code
.onUnload Source code
.orderDotsUnderscoreFirst Man page Source code
.pkgEnv Man page
.pkgSnapshot Source code
.preDigestByClass Man page
.preDigestByClass,ANY-method Man page
.prefix Man page Source code
.prepareFileBackedRaster Man page Source code
.prepareOutput Man page
.prepareOutput,ANY-method Man page
.prepareOutput,RasterLayer-method Man page
.purge Man page Source code
.removeCacheAtts Man page Source code
.robustDigest Man page
.robustDigest,ANY-method Man page
.robustDigest,Path-method Man page
.robustDigest,Raster-method Man page
.robustDigest,Spatial-method Man page
.robustDigest,character-method Man page
.robustDigest,cluster-method Man page
.robustDigest,data.frame-method Man page
.robustDigest,environment-method Man page
.robustDigest,expression-method Man page
.robustDigest,function-method Man page
.robustDigest,list-method Man page
.robustDigestFormatOnly Source code
.setSubAttrInList Man page Source code
.similarFilesInCheckSums Source code
.sortDotsUnderscoreFirst Man page Source code
.suffix Man page Source code
.tagsByClass Man page
.tagsByClass,ANY-method Man page
.testForArchiveExtract Man page Source code
.tryExtractFromArchive Source code
.unlistToCharacter Source code
.unrarPath Man page
.whichExtractFn Source code
Cache Man page
Cache,ANY-method Man page
CacheDigest Man page Source code
Checksums Man page
Checksums,character,logical-method Man page
Checksums,character,missing-method Man page
Copy Man page
Copy,ANY-method Man page
Copy,Raster-method Man page
Copy,data.frame-method Man page
Copy,data.table-method Man page
Copy,environment-method Man page
Copy,list-method Man page
Filenames Man page
Filenames,ANY-method Man page
Filenames,Raster-method Man page
Filenames,RasterStack-method Man page
Filenames,environment-method Man page
Filenames,list-method Man page
Path-class Man page
Require Man page Source code
`%<%` Source code
`%C%` Source code
appendChecksumsTable Source code
archiveExtractBinary Man page
asPath Man page Source code
asPath.character Man page Source code
asPath.null Man page Source code
assessDataType Man page Source code
assessDataType.Raster Man page Source code
assessDataType.RasterStack Man page Source code
assessDataType.default Man page Source code
assessDataTypeGDAL Man page Source code
assessGoogle Source code
available.packagesMem Man page Source code
basename2 Man page Source code
cc Man page Source code
checkAndMakeCloudFolderID Man page Source code
checkFutures Source code
checkGDALVersion Man page
checkPath Man page
checkPath,NULL,ANY-method Man page
checkPath,character,logical-method Man page
checkPath,character,missing-method Man page
checkPath,missing,ANY-method Man page
checkoutVersion Man page Source code
chooseCRANmirror2 Source code
clearCache Man page
clearCache,ANY-method Man page
clearStubArtifacts Man page
clearStubArtifacts,ANY-method Man page
cloudCache Man page Source code
cloudCheckOld Man page Source code
cloudDownload Man page Source code
cloudDownloadRasterBackend Source code
cloudSyncCacheOld Man page Source code
cloudUpload Man page Source code
cloudUploadFromCache Man page Source code
cloudUploadRasterBackends Source code
cloudWriteOld Man page Source code
compareNA Man page Source code
convertPaths Man page Source code
convertRasterPaths Man page Source code
copyFile Man page
copySingleFile Man page Source code
cropInputs Man page Source code
cropInputs.default Man page Source code
cropInputs.sf Man page Source code
cropInputs.spatialObjects Man page Source code
determineFilename Man page Source code
determineNestedTags Source code
devModeFn1 Source code
dlGeneric Man page Source code
dlGoogle Man page Source code
downloadFile Man page Source code
downloadRemote Source code
extractFromArchive Man page Source code
fastMask Man page
fixErrors Man page Source code
fixErrors.SpatialPolygons Man page Source code
fixErrors.default Man page Source code
fixErrors.sf Man page Source code
getArtifact Man page Source code
getCRANrepos Source code
getCacheId Man page Source code
getCacheRepos Source code
getFunctionName Man page Source code
getGDALVersion Man page Source code
getLocalTags Source code
getUserTags Man page Source code
guessAtTarget Man page
installVersions Man page Source code
installedVersions Man page Source code
installedVersionsQuick Source code
isInteractive Man page Source code
isOrHasRaster Source code
isWindows Man page Source code
keepCache Man page
keepCache,ANY-method Man page
linkOrCopy Man page Source code
makeMemoisable Man page Source code
makeMemoisable.default Man page Source code
maskInputs Man page Source code
maskInputs.Raster Man page Source code
maskInputs.Spatial Man page Source code
maskInputs.sf Man page Source code
mergeCache Man page
mergeCache,ANY-method Man page
missingFiles Source code
moveAttributes Source code
newLibPaths Man page Source code
nextNumericName Source code
normPath Man page
normPath,NULL-method Man page
normPath,character-method Man page
normPath,list-method Man page
normPath,missing-method Man page
objSize Man page Source code
objSize.Path Man page Source code
objSize.default Man page Source code
objSize.environment Man page Source code
objSize.function Man page Source code
objSize.list Man page Source code
objSizeSession Man page Source code
package_dependenciesMem Man page
pickFirstVersion Source code
pipe Man page
pkgDep Man page Source code
pkgDep2 Man page Source code
pkgSnapshot Man page Source code
postProcess Man page Source code
postProcess.default Man page Source code
postProcess.list Man page Source code
postProcess.quosure Source code
postProcess.sf Man page Source code
postProcess.spatialObjects Man page Source code
postProcessAllSpatial Source code
postProcessChecks Source code
preProcess Man page Source code
prepInputs Man page Source code
projectInputs Man page Source code
projectInputs.Raster Man page Source code
projectInputs.Spatial Man page Source code
projectInputs.default Man page Source code
projectInputs.sf Man page Source code
reproducible Man page
reproducible-package Man page
reproducibleOptions Man page Source code
retry Man page Source code
rndstr Source code
searchFull Man page Source code
searchFullEx Man page Source code
showCache Man page
showCache,ANY-method Man page
showLocalRepo2 Source code
showLocalRepo3 Source code
suffix Man page
tempdir2 Man page Source code
testForArchiveExtract Man page
unmakeMemoisable Man page Source code
unmakeMemoisable.default Man page Source code
unrarPath Man page
useETM Source code
verboseDF1 Source code
verboseDF2 Source code
verboseDF3 Source code
verboseMessage1 Source code
verboseMessage2 Source code
verboseMessage3 Source code
verboseTime Source code
writeChecksumsTable Source code
writeFuture Man page Source code
writeOutputs Man page Source code
writeOutputs.Raster Man page Source code
writeOutputs.Spatial Man page Source code
writeOutputs.default Man page Source code
writeOutputs.sf Man page Source code
PredictiveEcology/reproducible documentation built on Dec. 2, 2019, 10:47 p.m.