Files in PredictiveEcology/reproducible

Enhance Reproducibility of R Code

.Rbuildignore

.gitattributes

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.github/workflows/lint.yaml

.github/workflows/pkgdown.yaml

.github/workflows/revdeps.yaml

.github/workflows/rhub.yaml

.github/workflows/test-coverage.yaml

.github/workflows/update-citation-cff.yaml

.gitignore

.lintr

CITATION.cff

CONTRIBUTING.md

CRAN-SUBMISSION

DESCRIPTION

NAMESPACE

NEWS.md R/DBI.R R/cache-helpers.R R/cache-internals.R R/cache.R R/cacheGeo.R R/checksums.R R/cloud.R R/convertPaths.R R/copy.R R/download.R R/exportedMethods.R R/gis.R R/helpers.R R/messages.R R/objectSize.R R/options.R R/packages.R R/paths.R

R/pipe.R

R/postProcess.R R/postProcessTo.R R/preProcess.R R/prepInputs.R

R/reproducible-deprecated.R

R/reproducible-package.R R/robustDigest.R R/search.R R/showCacheEtc.R R/spatialObjects-class.R R/terra-migration.R R/zzz.R README.md

_pkgdown.yml

cheatsheets/reproducible-cheatsheet.key

cheatsheets/reproducible-cheatsheet.pdf

codecov.yml

cran-comments.md

inst/CITATION

inst/WORDLIST

inst/ex/luxSmall.cpg

inst/ex/luxSmall.dbf

inst/ex/luxSmall.prj

inst/ex/luxSmall.shp

inst/ex/luxSmall.shx

inst/examples/example_Cache.R inst/examples/example_assessDataType.R inst/examples/example_checkPath.R inst/examples/example_postProcess.R man/Cache.Rd man/CacheDigest.Rd man/CacheGeo.Rd man/CacheHelpers.Rd man/Checksums.Rd man/Copy.Rd man/Filenames.Rd man/Path-class.Rd man/archiveExtractBinary.Rd man/assessDataType.Rd man/basename2.Rd man/checkAndMakeCloudFolderID.Rd man/checkPath.Rd man/checkRelative.Rd man/cloudDownload.Rd man/cloudUploadFromCache.Rd man/compareNA.Rd man/convertPaths.Rd man/copyFile.Rd man/debugCache.Rd man/deprecated.Rd man/determineFilename.Rd man/digest.Rd man/dlGeneric.Rd man/dlGoogle.Rd man/dot-file.move.Rd man/dot-formalsNotInCurrentDots.Rd man/dot-removeCacheAtts.Rd man/dot-requireNamespace.Rd man/dotWrap.Rd man/downloadFile.Rd man/downloadRemote.Rd man/exportedMethods.Rd man/extractFromArchive.Rd man/fastMask.Rd

man/figures/lifecycle-archived.svg

man/figures/lifecycle-defunct.svg

man/figures/lifecycle-deprecated.svg

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-maturing.svg

man/figures/lifecycle-questioning.svg

man/figures/lifecycle-soft-deprecated.svg

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/fixErrorsIn.Rd man/grepSysCalls.Rd man/guessAtTarget.Rd man/internetExists.Rd man/isInteractive.Rd man/isUpdated.Rd man/isWindows.Rd man/linkOrCopy.Rd man/listFilesInArchive.Rd man/mergeCache.Rd man/messageColoured.Rd man/movedCache.Rd man/normPath.Rd man/objSize.Rd man/paddedFloatToChar.Rd man/pkgEnv.Rd man/postProcess.Rd man/postProcessTo.Rd man/preProcess.Rd man/prefix.Rd man/prepInputs.Rd man/prepareFileBackedRaster.Rd man/purge.Rd man/rasterRead.Rd man/relativePaths.Rd man/reproducible-package.Rd man/reproducibleOptions.Rd man/retry.Rd man/robustDigest.Rd man/saveToCache.Rd man/search.Rd man/set.randomseed.Rd man/setSubAttrInList.Rd man/studyAreaName.Rd man/tempdir2.Rd man/tempfile2.Rd man/terra-migration.Rd man/testForArchiveExtract.Rd man/unrarPath.Rd man/viewCache.Rd man/writeFuture.Rd

reproducible.Rproj

revdep/.gitignore

revdep/README.md revdep/check.R revdep/cran.md

revdep/email.yml

revdep/failures.md revdep/problems.md

stickers/hexsticker.png

stickers/reproducible-hexsticker.R

stickers/synchronize-hexagon-1-512.png

tests/test-all.R

tests/testthat/.gitignore

tests/testthat/helper-allEqual.R tests/testthat/setup.R tests/testthat/test-cache.R tests/testthat/test-cacheGeo.R tests/testthat/test-cacheHelpers.R tests/testthat/test-checkPath.R tests/testthat/test-checksums.R tests/testthat/test-cloud.R tests/testthat/test-cluster.R tests/testthat/test-copy.R tests/testthat/test-devMode.R tests/testthat/test-download.R tests/testthat/test-examples.R tests/testthat/test-filesMissingExtension.R tests/testthat/test-gis.R tests/testthat/test-misc.R tests/testthat/test-multipleCacheRepo.R tests/testthat/test-postProcess.R tests/testthat/test-postProcessTerra.R tests/testthat/test-preProcessDoesntWork.R tests/testthat/test-preProcessWorks.R tests/testthat/test-prepInputs-large-files.R tests/testthat/test-prepInputs.R tests/testthat/test-prepInputsInNestedArchives.R tests/testthat/test-reproducibleVerbose.R tests/testthat/test-robustDigest.R tests/testthat/test-symlinks.R vignettes/Intro-to-Cache.Rmd

PredictiveEcology/reproducible documentation built on April 19, 2024, 7:23 p.m.