R/plot_la.R

In Prof-ThiagoOliveira/lcc: Longitudinal Concordance Correlation

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# Package: lcc                                                        #
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# File: plot_la.R                                                     #
# Contains: plot_la function                                          #
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# Written by Thiago de Paula Oliveira                                 #
# copyright (c) 2017-18, Thiago P. Oliveira                           #
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# First version: 11/10/2017                                           #
# Last update: 03/06/2020                                             #
# License: GNU General Public License version 2 (June, 1991) or later #
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##' @title Internal Function to Prepare the \code{plotBuilder_la} Function
##'
##' @description This function is internally called to prepare
##'   the \code{\link[lcc]{plotBuilder_la}} function.
##'
##' @usage NULL
##'
##' @author Thiago de Paula Oliveira, \email{thiago.paula.oliveira@@alumni.usp.br}
##'
##' @keywords internal
plot_la <- function(Cb, ENV.Cb, tk.plot, tk.plot2, ldb, model, ci, arg, ...) {
  CCC <- CCC_lin(dataset = model$data, resp = "resp", subject = "subject", 
                 method = "method", time = "time")
  Pearson <- Pearson(dataset = model$data, resp = "resp", subject = "subject", 
                     method = "method", time = "time")
  
  if (ci) {
    plotBuilder_la(CCC = CCC, Pearson = Pearson, ENV.Cb = ENV.Cb, 
                   tk.plot = tk.plot, tk.plot2 = tk.plot2, ldb = ldb, Cb = Cb, 
                   model = model, ci = TRUE, arg = arg, ...)
  } else {
    plotBuilder_la(CCC = CCC, Pearson = Pearson, tk.plot = tk.plot, 
                   tk.plot2 = tk.plot2, ldb = ldb, Cb = Cb, model = model,
                   ci = FALSE, arg = arg, ...)
  }
}