Files in R4EPI/sitrep
Report templates and helper functions for EPI

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/age-categories.R R/age-pyramid.R R/cfr.R R/check_templates.R R/descriptive-table.R R/find_breaks.R R/find_date_cause.R R/gen_data.R R/gen_polygon.R R/gen_population.R R/helpers.R R/inline_fun.R R/msf_dict_survey.R R/nutrition.R R/population_weights.R R/relabel_proportions.R R/sample-size.R R/survey.R R/tabulate_survey.R R/template_data_frame.R R/unite_ci.R R/univariate-analysis.R R/zcurve.R README.Rmd README.md
appveyor.yml
codecov.yml
examples/mortality/sample.Rmd examples/mortality/sample.md
examples/mortality/sample_files/figure-gfm/unnamed-chunk-6-1.png
examples/mortality/sample_files/figure-gfm/unnamed-chunk-7-1.png
examples/outbreak/sample.Rmd examples/outbreak/sample.md
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-10-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-18-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-19-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-20-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-21-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-22-1.png
examples/outbreak/sample_files/figure-gfm/unnamed-chunk-9-1.png
inst/extdata/MSF-outbreak-dict.xlsx
inst/extdata/MSF-survey-dict.xlsx
inst/extdata/coords.csv
inst/rmarkdown/templates/ajs_outbreak/skeleton/skeleton.Rmd
inst/rmarkdown/templates/ajs_outbreak/template.yaml
inst/rmarkdown/templates/cholera_outbreak/skeleton/skeleton.Rmd
inst/rmarkdown/templates/cholera_outbreak/template.yaml
inst/rmarkdown/templates/measles_outbreak/skeleton/skeleton.Rmd
inst/rmarkdown/templates/measles_outbreak/template.yaml
inst/rmarkdown/templates/meningitis_outbreak/skeleton/skeleton.Rmd
inst/rmarkdown/templates/meningitis_outbreak/template.yaml
inst/rmarkdown/templates/mortality/skeleton/skeleton.Rmd
inst/rmarkdown/templates/mortality/template.yaml
inst/rmarkdown/templates/nutrition/skeleton/skeleton.Rmd
inst/rmarkdown/templates/nutrition/template.yaml
inst/rmarkdown/templates/vaccination/skeleton/skeleton.Rmd
inst/rmarkdown/templates/vaccination/template.yaml
man/add_weights.Rd man/age_categories.Rd man/attack_rate.Rd man/available_sitrep_templates.Rd man/check_sitrep_templates.Rd man/descriptive.Rd
man/figures/README-pressure-1.png
man/find_breaks.Rd man/find_date_cause.Rd man/fmt_ci.Rd man/fmt_count.Rd man/gen_polygon.Rd man/gen_population.Rd man/msf_dict.Rd man/plot_age_pyramid.Rd man/rename_redundant.Rd man/sample_size.Rd man/sample_size_households.Rd man/stratify_zscores.Rd man/survey_ciprop_foreach_binary_variable.Rd man/suvery_ciprob.Rd man/suvery_ciprob_stratified.Rd man/tabulate_survey.Rd man/unite_ci.Rd man/univariate_analysis.Rd man/zcurve.Rd
sitrep.Rproj
tests/figs/age-pyramid-tests/default-age-pyramid.svg
tests/figs/age-pyramid-tests/default-no-pyramid.svg
tests/figs/age-pyramid-tests/gender-age-pyramid.svg
tests/figs/age-pyramid-tests/ill-age-pyramid.svg
tests/figs/age-pyramid-tests/missing-age-pyramid.svg
tests/figs/deps.txt
tests/testthat.R tests/testthat/test-age-pyramid.R tests/testthat/test-descriptive.R tests/testthat/test-fmt_ci.R tests/testthat/test-proportion.R tests/testthat/test-tabulate_survey.R tests/testthat/test-templates.R tests/testthat/test-zcurve.R
R4EPI/sitrep documentation built on July 6, 2019, 9:42 p.m.