API for SydneyBioX/scdney
Single cell data integrative analysis

Global functions
.CIbarColor Source code
.Rtsne_cpp Source code
.bootstrap_clustering Source code
.calculateProp Source code
.scran_high_var Source code
.stratifiedBootstrap Source code
ClassifyError Source code
DWKNNcor Source code
KNNcor Source code
Rtsne Source code
WKNNcor Source code
alpha Source code
bAccuracy Man page Source code
barplotCI Man page Source code
calEnsembleRes Source code
calculateSimilarity Source code
collap Source code
constructTree Source code
currentClass Source code
cutdigits Source code
cutree_iterative Source code
cutzeros Source code
densityCI Man page Source code
digits Source code
distancematrix Source code
doBI Source code
doChisSquared Source code
doDD Source code
doDV Source code
doLimma Source code
evalScClustBench Man page
featureSelection Source code
findMarker Man page Source code
fitGLM Man page Source code
fitLC Source code
funMixModel Source code
getEnsembleRes Source code
getN Man page Source code
getResByWeights Source code
getThreshold Source code
hierarchyKNNcor Source code
hopach Source code
init_fit Source code
labelstomss Source code
learningCurve Man page Source code
matPCs Man page Source code
msscheck Source code
msscollap Source code
msscomplete Source code
mssinitlevel Source code
mssmulticollap Source code
mssnextlevel Source code
mssrundown Source code
msssplitcluster Source code
multiAdaSampling Man page Source code
newnextlevel Source code
newsplitcluster Source code
nonzeros Source code
orderelements Source code
paircoll Source code
plotKmeansEval Man page
plotSimlrEval Man page
predRes Source code
predict_scClassify Man page Source code
quiet Source code
runHOPACH Man page Source code
scClassify Man page Source code
scClassify_example Man page
scClust Man page Source code
scClustBench Man page Source code
scDC_clustering Man page
scDC_noClustering Man page
silcheck Source code
sim Man page
train_scClassify Man page Source code
wtd_rank2 Source code
SydneyBioX/scdney documentation built on Aug. 22, 2019, 10:55 a.m.