evalScClustBench: evalScClustBench

Description Usage Arguments Details Value

Description

Evaluate cluster results from scClustBench with evaluation metrics NMI (Normalised Mutual Information), ARI (Adjusted Rand Index), FM (Fowlkes–Mallows) index and Jaccard Index

Usage

1
evalScClustBench(sub.result, method = "simlr")

Arguments

sub.result

An object returned from scClustBench

method

A method used in scClustBench

Details

Evaluate kmeans cluster result from scClustBench

Value

A data frame with cluster evaluation for each similarity metric and for each repeats.


SydneyBioX/scdney documentation built on June 17, 2019, 7:31 a.m.