findmarker: findMarker

Description Usage Arguments Value

Description

Identify marker genes in the given expression matrix.

Usage

1
findMarker(mat, cluster, cluster_id)

Arguments

mat

A (m x n) data matrix of gene expression measurements of individual cells with rows representing genes and columns representing cells.

cluster

A cluster output (vector) from clustering

cluster_id

Id (numeric) cluster group in 'cluster'

Value

A data frame with gene's ordered by their significance.


SydneyBioX/scdney documentation built on Aug. 22, 2019, 10:55 a.m.