filter_and_annotate_calls: filter_and_annotate_calls
In TranslationalBioinformaticsLab/INDELfindR: Indel Detection from Human Genomic Sequence Data
filter_and_annotate_calls R Documentation
filter_and_annotate_calls
Description
filter_and_annotate_calls
Usage
filter_and_annotate_calls(
master_indel_record_table,
mapq_threshold,
bamPath,
number_cores,
min_supporting_reads,
min_vaf,
min_read_depth,
each_chromosome
)
Arguments
master_indel_record_table
master_indel_record_table
mapq_threshold
mapq_threshold
bamPath
bamPath
number_cores
number_cores
min_supporting_reads
min_supporting_reads
min_vaf
min_vaf
min_read_depth
min_read_depth
each_chromosome
each_chromosome
Value
collapsed_read_counts_with_strand_correction_pvalue_for_writing_filtered
TranslationalBioinformaticsLab/INDELfindR documentation built on Nov. 11, 2023, 11:35 p.m.
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| filter_and_annotate_calls | R Documentation |
filter_and_annotate_calls
Description
filter_and_annotate_calls
Usage
filter_and_annotate_calls(
master_indel_record_table,
mapq_threshold,
bamPath,
number_cores,
min_supporting_reads,
min_vaf,
min_read_depth,
each_chromosome
)
Arguments
master_indel_record_table |
master_indel_record_table |
mapq_threshold |
mapq_threshold |
bamPath |
bamPath |
number_cores |
number_cores |
min_supporting_reads |
min_supporting_reads |
min_vaf |
min_vaf |
min_read_depth |
min_read_depth |
each_chromosome |
each_chromosome |
Value
collapsed_read_counts_with_strand_correction_pvalue_for_writing_filtered
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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