The msdata2 package contains a set of published identification/quantification proteomics datasets. The purpose of the package is to provide standard and curated datasets to facilitate the benchmarking of proteomics workflows. All the datasets in msdata2 will be cleaned, formatted and compressed as MSnSet instances.
In the future, we will also include large raw MS data, making use of the ExperimentHub cloud infrastructure.
if (!requireNamespace("devtools", quietly=TRUE))
install.packages("devtools")
devtools::install_github("UCLouvain-CBIO/msdata2")
Currently, there are 1 datasets available in msdata2.
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