Files in USEPA/CompTox-ToxCast-tcpl
ToxCast Data Analysis Pipeline

.Rbuildignore
.gitignore
CONTRIBUTING.md
DESCRIPTION
NAMESPACE
NEWS
R/Models.R R/assay_funcs.R R/attachFormals.R R/blineShift.R R/buildAssayQ.R R/chemQueries.R R/clearSQLite.R R/config_funcs.R R/convertNames.R R/data.R R/drawCircles.R R/flareFunc.R R/getConfFile.R R/hill_utils.R R/interlaceFunc.R R/is.odd.R R/load6DR.R R/lu.R R/lw.R R/mc1.R R/mc2.R R/mc2_mthds.R R/mc3.R R/mc3_mthds.R R/mc4.R R/mc4_mthds.R R/mc5.R R/mc5_mthds.R R/mc6.R R/mc6_mthds.R R/mthd_funcs.R R/multProc.R R/multiplotFit.R R/onAttach.R R/onLoad.R R/plateHeat.R R/plotFit.R R/prepField.R R/query_funcs.R R/registerMthd.R R/rgstr_funcs.R R/sc1.R R/sc1_mthds.R R/sc2.R R/sc2_mthds.R R/sink.reset.R R/tcplAICProb.R R/tcplAddModel.R R/tcplAppend.R R/tcplCascade.R R/tcplCode2CASN.R R/tcplConf.R R/tcplConfDefault.R R/tcplConfExample.R R/tcplConfList.R R/tcplConfLoad.R R/tcplConfReset.R R/tcplConfSave.R R/tcplCytoPt.R R/tcplDelete.R R/tcplFit.R R/tcplGetAeid.R R/tcplHillACXX.R R/tcplHillConc.R R/tcplHillVal.R R/tcplListFlds.R R/tcplLiteInit.R R/tcplLoadAcid.R R/tcplLoadAeid.R R/tcplLoadAid.R R/tcplLoadAsid.R R/tcplLoadChem.R R/tcplLoadClib.R R/tcplLoadData.R R/tcplLoadUnit.R R/tcplLvlCount.R R/tcplMakeAeidMultiPlts.R R/tcplMakeAeidPlts.R R/tcplMakeChidMultiPlts.R R/tcplMthdAssign.R R/tcplMthdClear.R R/tcplMthdList.R R/tcplMthdLoad.R R/tcplMultiplot.R R/tcplObjCnst.R R/tcplObjGnls.R R/tcplObjHill.R R/tcplPlotFitc.R R/tcplPlotFits.R R/tcplPlotM4ID.R R/tcplPlotPlate.R R/tcplPrepOtpt.R R/tcplQuery.R R/tcplRegister.R R/tcplRun.R R/tcplSendQuery.R R/tcplSubsetChid.R R/tcplUpdate.R R/tcplVarMat.R R/tcplWriteData.R R/tcplWriteLvl0.R R/tcpldbStats.R README.md cran-comments.md
data/chdat.rda
data/mcdat.rda
data/scdat.rda
inst/TCPL.config
inst/csv/assay.csv
inst/csv/assay_component.csv
inst/csv/assay_component_endpoint.csv
inst/csv/assay_component_map.csv
inst/csv/assay_reagent.csv
inst/csv/assay_source.csv
inst/csv/chemical.csv
inst/csv/chemical_library.csv
inst/csv/mc0.csv
inst/csv/mc1.csv
inst/csv/mc2.csv
inst/csv/mc2_acid.csv
inst/csv/mc2_methods.csv
inst/csv/mc3.csv
inst/csv/mc3_aeid.csv
inst/csv/mc3_methods.csv
inst/csv/mc4.csv
inst/csv/mc4_aeid.csv
inst/csv/mc4_agg.csv
inst/csv/mc4_methods.csv
inst/csv/mc5.csv
inst/csv/mc5_aeid.csv
inst/csv/mc5_chid.csv
inst/csv/mc5_fit_categories.csv
inst/csv/mc5_methods.csv
inst/csv/mc6.csv
inst/csv/mc6_aeid.csv
inst/csv/mc6_methods.csv
inst/csv/sample.csv
inst/csv/sc0.csv
inst/csv/sc1.csv
inst/csv/sc1_aeid.csv
inst/csv/sc1_methods.csv
inst/csv/sc2.csv
inst/csv/sc2_aeid.csv
inst/csv/sc2_agg.csv
inst/csv/sc2_methods.csv
inst/doc/Data_processing.R inst/doc/Data_processing.Rmd
inst/doc/Data_processing.html
inst/doc/Data_retrieval.R inst/doc/Data_retrieval.Rmd
inst/doc/Data_retrieval.html
inst/doc/Introduction_Appendices.R inst/doc/Introduction_Appendices.Rmd
inst/doc/Introduction_Appendices.html
inst/example/assay.csv
inst/example/assay_component.csv
inst/example/assay_component_endpoint.csv
inst/example/assay_component_map.csv
inst/example/assay_source.csv
inst/example/chemical.csv
inst/example/chemical_library.csv
inst/example/mc0.csv
inst/example/mc1.csv
inst/example/mc2.csv
inst/example/mc2_acid.csv
inst/example/mc2_methods.csv
inst/example/mc3.csv
inst/example/mc3_aeid.csv
inst/example/mc3_methods.csv
inst/example/mc4.csv
inst/example/mc4_aeid.csv
inst/example/mc4_agg.csv
inst/example/mc4_methods.csv
inst/example/mc5.csv
inst/example/mc5_aeid.csv
inst/example/mc5_fit_categories.csv
inst/example/mc5_methods.csv
inst/example/mc6.csv
inst/example/mc6_aeid.csv
inst/example/mc6_methods.csv
inst/example/sample.csv
inst/example/sc0.csv
inst/example/sc1.csv
inst/example/sc1_aeid.csv
inst/example/sc1_methods.csv
inst/example/sc2.csv
inst/example/sc2_aeid.csv
inst/example/sc2_agg.csv
inst/example/sc2_methods.csv
man-roxygen/loadlvl.R man-roxygen/proclvl.R man/MC2_Methods.Rd man/MC3_Methods.Rd man/MC4_Methods.Rd man/MC5_Methods.Rd man/MC6_Methods.Rd man/Models.Rd man/SC1_Methods.Rd man/SC2_Methods.Rd man/assay_funcs.Rd man/blineShift.Rd man/chdat.Rd man/config_funcs.Rd man/dot-buildAssayQ.Rd man/dot-convertNames.Rd man/dot-load6DR.Rd man/dot-plateHeat.Rd man/dot-prepField.Rd man/flareFunc.Rd man/hill_utils.Rd man/interlaceFunc.Rd man/is.odd.Rd man/lu.Rd man/lw.Rd man/mc1.Rd man/mc2.Rd man/mc3.Rd man/mc4.Rd man/mc5.Rd man/mc6.Rd man/mcdat.Rd man/mthd_funcs.Rd man/query_funcs.Rd man/registerMthd.Rd man/rgstr_funcs.Rd man/sc1.Rd man/sc2.Rd man/scdat.Rd man/sink.reset.Rd man/tcplAICProb.Rd man/tcplAddModel.Rd man/tcplAppend.Rd man/tcplCascade.Rd man/tcplCode2CASN.Rd man/tcplCytoPt.Rd man/tcplDelete.Rd man/tcplFit.Rd man/tcplGetAeid.Rd man/tcplListFlds.Rd man/tcplLoadChem.Rd man/tcplLoadClib.Rd man/tcplLoadData.Rd man/tcplLoadUnit.Rd man/tcplLvlCount.Rd man/tcplMakeAeidMultiPlts.Rd man/tcplMakeAeidPlts.Rd man/tcplMakeChidMultiPlts.Rd man/tcplMultiplot.Rd man/tcplPlotFitc.Rd man/tcplPlotFits.Rd man/tcplPlotM4ID.Rd man/tcplPlotPlate.Rd man/tcplPrepOtpt.Rd man/tcplRun.Rd man/tcplSubsetChid.Rd man/tcplVarMat.Rd man/tcplWriteData.Rd man/tcplWriteLvl0.Rd man/tcpldbStats.Rd vignettes/Data_processing.Rmd vignettes/Data_retrieval.Rmd vignettes/Introduction_Appendices.Rmd
USEPA/CompTox-ToxCast-tcpl documentation built on March 1, 2019, 9:20 p.m.