CHANGELOG.md

In Yves-CHEN/sCNAphase: Esitmate tumor CN profile and tumor cellularity.

Version 1.4.1

Date: Sun Oct 18 2015 Author: Wenhan

• Adding in the function annotations, produce a user manual.

Version 1.3.1

Date: Sun Oct 18 2015 Author: Wenhan

• reRun using the re-run to determine the ploidy
• tmpType for different init setting of the tpm matrix

Version 1.2.1

Date: Wed Jul 29 2015 Author: Wenhan

• Using beta-binomial for AD likelihood calculation

Version 1.1.1

Date: Sat Jul 18 2015 Author: Wenhan

• Rename the package to sCNAphase, fixed the dead funcs
• tide the code with redefined functions in utils.R

Version 1.0.1

Date: Sat Jun 13 2015 Author: Wenhan

• relax converge thresh to 0.5

Version 0.1.1

Date: Mon Dec 22 2014 Author: Wenhan Chen

• First stable. Using Baum-welch & Sbplx by default

Yves-CHEN/sCNAphase documentation built on May 10, 2019, 1:54 a.m.