Tx2Gene: Transcript-to-gene identifier mappings

Description Usage Arguments Value Note See Also Examples

Description

Transcript-to-gene identifier mappings

Usage

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Tx2Gene(object, ...)

## S4 method for signature 'DataFrame'
Tx2Gene(object, quiet = FALSE)

## S4 method for signature 'GRanges'
Tx2Gene(object, ...)

## S4 method for signature 'GRangesList'
Tx2Gene(object, ...)

## S4 method for signature 'data.frame'
Tx2Gene(object, ...)

## S4 method for signature 'matrix'
Tx2Gene(object, ...)

Arguments

object

Object.

...

Arguments pass through to DataFrame method.

quiet

logical(1). Perform command quietly, suppressing messages.

Value

Tx2Gene.

Note

Updated 2021-08-10.

See Also

makeTx2Gene().

Examples

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## DataFrame ====
df <- DataFrame(
    "txId" = c(
        "ENST00000635602.1",
        "ENST00000635506.1"
    ),
    "geneId" = c(
        "ENSG00000283061.1",
        "ENSG00000283061.1"
    )
)
t2g <- Tx2Gene(df)
print(t2g)

acidgenomics/AcidGenomes documentation built on Sept. 16, 2021, 7:30 p.m.