geneIDs: Gene identifiers

Description Usage Arguments Value Note Examples

View source: R/ftp-geneIDs.R

Description

Gene identifiers

Usage

1
geneIDs(release = getOption(x = "wormbase.release", default = NULL))

Arguments

release

character(1) or NULL. WormBase release. If NULL (recommended), defaults to current production release release available on the WormBase website. Legacy releases can be specified as a character string (e.g. "WS267").

Value

DataFrame.

Note

As of WS269 release, some non-N2 gene IDs are included in the flat files available on the WormBase FTP server. These annotations are removed from the return here, using grep matching to return only WBGene entries.

Updated 2021-02-18.

Examples

1
2
x <- geneIDs()
print(x)

acidgenomics/WormBase documentation built on March 16, 2021, 8:53 p.m.