geneSynonyms: Gene synonyms

Description Usage Arguments Value Note Examples

View source: R/geneSynonyms.R

Description

Look up gene synonyms from NCBI.

Usage

1

Arguments

organism

character(1). Full Latin organism name (e.g. "Homo sapiens").

Value

SplitDataFrameList. Split by geneID column. Handles genes with duplicate entries (e.g. ENSG00000004866).

Note

Synonym support for Caenorhabditis elegans is poor on NCBI. Use the wormbase package instead.

Updated 2020-05-11.

Examples

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options(acid.test = TRUE)
x <- geneSynonyms(organism = "Homo sapiens")
print(x)

acidgenomics/basejump documentation built on Aug. 15, 2020, 10:21 a.m.