R/imports.R

In acidgenomics/freerange: Generate and Manipulate Genomic Ranges

#' @importClassesFrom GenomicRanges GRanges GRangesList
#' @importClassesFrom S4Vectors DataFrame
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#' @importMethodsFrom transformer coerce
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#' @importFrom AnnotationHub AnnotationHub query snapshotDate
#' @importFrom BiocGenerics organism
#' @importFrom GenomeInfoDb seqnames
#' @importFrom GenomicFeatures genes makeTxDbFromGFF makeTxDbFromGRanges
#'   transcripts
#' @importFrom GenomicRanges GRanges ranges
#' @importFrom IRanges IRanges
#' @importFrom S4Vectors DataFrame Rle %in% decode head mcols mcols<- metadata
#'   metadata<- split tail
#' @importFrom acidbase bapply matchArgsToDoCall printString
#' @importFrom brio import removeNA pasteURL sanitizeNA
#' @importFrom ensembldb ensemblVersion
#' @importFrom goalie areDisjointSets assert hasDuplicates hasInternet hasLength
#'   hasNames hasNoDuplicates hasRows isAny isCharacter isFlag isInt
#'   isMatchingRegex isString isSubset
#' @importFrom methods as is validObject
#' @importFrom syntactic camelCase makeNames
#' @importFrom transformer as_tibble leftJoin
#' @importFrom utils capture.output data globalVariables installed.packages
#'   packageVersion
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