R/confint.amh.R

Defines functions confint.amh

Documented in confint.amh

## File Name: confint.amh.R
## File Version: 0.08

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# confidence interval
confint.amh <- function( object, parm, level=.95,  ... )
{
    mcmcobj <- object$mcmcobj
    exclude <- "deviance"
    mcmcobj <- mcmcobj[, ! ( colnames(mcmcobj) %in% exclude ) ]
    if ( ! missing(parm) ){
        mcmcobj <- mcmcobj[,parm]
            }
    q1 <- ( 1 - level ) / 2
    h1 <- apply( mcmcobj, 2, stats::quantile, q1 )
    q2 <- 1 - ( 1 - level ) / 2
    h2 <- apply( mcmcobj, 2, stats::quantile, q2 )
    res <- data.frame( h1, h2)
    colnames(res)[1] <- paste0( round( 100*q1,1 ), " %")
    colnames(res)[2] <- paste0( round( 100*q2,1 ), " %")
    rownames(res) <- colnames(mcmcobj)
    return(res)
}
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alexanderrobitzsch/LAM documentation built on March 27, 2024, 5:36 a.m.