andreaskapou/BPRMeth2: Model higher-order methylation profiles

The BPRMeth package is a probabilistic method to quantify explicit features of methylation profiles, in a way that would make it easier to formally use such profiles in downstream modelling efforts, such as predicting gene expression levels or clustering genomic regions according to their methylation profiles.

Getting started

Package details

AuthorChantriolnt-Andreas Kapourani [aut, cre]
Bioconductor views Bayesian Clustering Coverage DNAMethylation Epigenetics FeatureExtraction GeneExpression GeneRegulation Genetics KEGG RNASeq Regression Sequencing SingleCell
MaintainerChantriolnt-Andreas Kapourani <[email protected]>
LicenseGPL-3
Version1.50.11
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("andreaskapou/BPRMeth2")
andreaskapou/BPRMeth2 documentation built on Jan. 13, 2018, 12:12 a.m.