Files in andzajan/mzmatch.R
mzmatch and PeakML integration for XCMS.

.gitattributes
DESCRIPTION
LICENSE
NAMESPACE
R/PeakML.BlankFilter.R R/PeakML.ComparePeakSets.R R/PeakML.DilutionTrendFilter.R R/PeakML.FilterPeakGroups.R R/PeakML.GapFiller.R R/PeakML.Isotope.DB2Text.R R/PeakML.Isotope.ReadDB.R R/PeakML.Isotope.TargettedIsotopes.R R/PeakML.Isotope.UntargettedIsotopes.R R/PeakML.Isotope.filterPeaks.R R/PeakML.Isotope.filteroutUnlabelled.R R/PeakML.Isotope.getAbunMtxList.R R/PeakML.Isotope.getChromData.R R/PeakML.Isotope.getFCMtx.R R/PeakML.Isotope.getFCMtxAbun.R R/PeakML.Isotope.getIsotopes.R R/PeakML.Isotope.getMassWindow.R R/PeakML.Isotope.getRatioMtxList.R R/PeakML.Isotope.getTrendList.R R/PeakML.Isotope.getTrendMtx.R R/PeakML.Isotope.plotSamples.R R/PeakML.Isotope.plotUntargettedIsotopes.R R/PeakML.Isotope.processTargettedIsotopes.R R/PeakML.Isotope.processUntargettedIsotopes.R R/PeakML.Methods.DBidToCompoundName.R R/PeakML.Methods.PeakShapeCorrelation.R R/PeakML.Methods.baseCorrection.R R/PeakML.Methods.combinePeakMLfiles.R R/PeakML.Methods.extractFileName.R R/PeakML.Methods.extractPeakGroups.R R/PeakML.Methods.formula2mass.R R/PeakML.Methods.getCarbon.R R/PeakML.Methods.getChromData.R R/PeakML.Methods.getCompleteTable.R R/PeakML.Methods.getESIpolarity.R R/PeakML.Methods.getElements.R R/PeakML.Methods.getGroupAnnotations.R R/PeakML.Methods.getMassCorrection.R R/PeakML.Methods.getPPMMass.R R/PeakML.Methods.getPPMWindow.R R/PeakML.Methods.getPeakData.R R/PeakML.Methods.getPhenoData.R R/PeakML.Methods.getProtonCoef.R R/PeakML.Methods.getProtonMass.R R/PeakML.Methods.getRTWindow.R R/PeakML.Methods.getRTWindowFromString.R R/PeakML.Methods.getRawDataPaths.R R/PeakML.Methods.getRawMat.R R/PeakML.Methods.getRawSignals.R R/PeakML.Methods.getStdErr.R R/PeakML.Methods.mzML.startTimeStamp.R R/PeakML.Methods.writeGroupAnnotations.R R/PeakML.Normalization.R R/PeakML.PeakChopper.R R/PeakML.Plot.BarPlot.R R/PeakML.Plot.Chromatograms.R R/PeakML.Plot.RankProducts.R R/PeakML.Plot.RelatedPeaks.R R/PeakML.QCIntensityCorrection.R R/PeakML.QCRSDFilter.R R/PeakML.QCSignalCorrection.R R/PeakML.RankProducts.R R/PeakML.Read.R R/PeakML.Viewer.R R/PeakML.Write.R R/PeakML.bubbleplot.R R/PeakML.get.attributes.R R/PeakML.trendPlot.R R/PeakML.xcms.read.R R/PeakML.xcms.write.R R/PeakML.xcms.write.SingleInstance.R R/PeakML.xcms.write.SingleMeasurement.R R/RCreateXMLDB.R R/TrendPlot.R R/mzmatch.R.Setup.R R/mzmatch.XML.data.base.parser.R R/mzmatch.init.R R/mzmatch.ipeak.Combine.R R/mzmatch.ipeak.ExtractBackgroundIons.R R/mzmatch.ipeak.align.CowCoda.R R/mzmatch.ipeak.convert.ConvertToText.R R/mzmatch.ipeak.db.CreateCycDB.R R/mzmatch.ipeak.db.CreateHMDB.R R/mzmatch.ipeak.db.CreateLMDB.R R/mzmatch.ipeak.db.DBToText.R R/mzmatch.ipeak.filter.FilterCluster.R R/mzmatch.ipeak.filter.FilterOnRelationIDs.R R/mzmatch.ipeak.filter.NoiseFilter.R R/mzmatch.ipeak.filter.RSDFilter.R R/mzmatch.ipeak.filter.SimpleFilter.R R/mzmatch.ipeak.graphics.PeakMLToTIC.R R/mzmatch.ipeak.normalisation.Normalisation.R R/mzmatch.ipeak.normalisation.VanDeSompele.R R/mzmatch.ipeak.sort.MetAssign.R R/mzmatch.ipeak.sort.PeakSort.R R/mzmatch.ipeak.sort.RelatedPeaks.R R/mzmatch.ipeak.util.BreakupRelated.R R/mzmatch.ipeak.util.ExtractSets.R R/mzmatch.ipeak.util.Identify.R R/mzmatch.ipeak.util.Recovery.R man/PeakML.BlankFilter.Rd man/PeakML.ComparePeakSets.Rd man/PeakML.DilutionTrendFilter.Rd man/PeakML.FilterPeakGroups.Rd man/PeakML.GapFiller.Rd man/PeakML.Isotope.DB2Text.Rd man/PeakML.Isotope.ReadDB.Rd man/PeakML.Isotope.TargettedIsotopes.Rd man/PeakML.Isotope.UntargettedIsotopes.Rd man/PeakML.Isotope.filterPeaks.Rd man/PeakML.Isotope.filteroutUnlabelled.Rd man/PeakML.Isotope.getAbunMtxList.Rd man/PeakML.Isotope.getChromData.Rd man/PeakML.Isotope.getFCMtx.Rd man/PeakML.Isotope.getFCMtxAbun.Rd man/PeakML.Isotope.getIsotopes.Rd man/PeakML.Isotope.getMassWindow.Rd man/PeakML.Isotope.getRatioMtxList.Rd man/PeakML.Isotope.getTrendList.Rd man/PeakML.Isotope.getTrendMtx.Rd man/PeakML.Isotope.plotSamples.Rd man/PeakML.Isotope.plotUntargettedIsotopes.Rd man/PeakML.Isotope.processTargettedIsotopes.Rd man/PeakML.Isotope.processUntargettedIsotopes.Rd man/PeakML.Methods.DBidToCompoundName.Rd man/PeakML.Methods.PeakShapeCorrelation.Rd man/PeakML.Methods.baseCorrection.Rd man/PeakML.Methods.combinePeakMLfiles.Rd man/PeakML.Methods.extractFileName.Rd man/PeakML.Methods.extractPeakSets.Rd man/PeakML.Methods.formula2mass.Rd man/PeakML.Methods.getCarbon.Rd man/PeakML.Methods.getChromData.Rd man/PeakML.Methods.getCompleteTable.Rd man/PeakML.Methods.getElements.Rd man/PeakML.Methods.getGroupAnnotations.Rd man/PeakML.Methods.getMassCorrection.Rd man/PeakML.Methods.getPPMMass.Rd man/PeakML.Methods.getPPMWindow.Rd man/PeakML.Methods.getPeakData.Rd man/PeakML.Methods.getPhenoData.Rd man/PeakML.Methods.getProtonCoef.Rd man/PeakML.Methods.getProtonMass.Rd man/PeakML.Methods.getRTWindow.Rd man/PeakML.Methods.getRTWindowFromString.Rd man/PeakML.Methods.getRawDataPaths.Rd man/PeakML.Methods.getRawMat.Rd man/PeakML.Methods.getRawSignals.Rd man/PeakML.Methods.getStdErr.Rd man/PeakML.Methods.writeGroupAnnotations.Rd man/PeakML.Normalization.Rd man/PeakML.Plot.BarPlot.Rd man/PeakML.Plot.Chromatograms.Rd man/PeakML.Plot.RankProducts.Rd man/PeakML.Plot.RelatedPeaks.Rd man/PeakML.RankProducts.Rd man/PeakML.Read.Rd man/PeakML.Viewer.Rd man/PeakML.Write.Rd man/PeakML.bubbleplot.Rd man/PeakML.get.attributes.Rd man/PeakML.trendPlot.Rd man/PeakML.xcms.read.Rd man/PeakML.xcms.write.Rd man/PeakML.xcms.write.SingleInstance.Rd man/PeakML.xcms.write.SingleMeasurement.Rd man/RCreateXMLDB.Rd man/TrendPlot.Rd man/mzmatch.R-package.Rd man/mzmatch.R.Setup.Rd man/mzmatch.XML.data.base.parser.Rd man/mzmatch.init.Rd man/mzmatch.ipeak.Combine.Rd man/mzmatch.ipeak.ExtractBackgroundIons.Rd man/mzmatch.ipeak.align.CowCoda.Rd man/mzmatch.ipeak.convert.ConvertToText.Rd man/mzmatch.ipeak.db.CreateCycDB.Rd man/mzmatch.ipeak.db.CreateHMDB.Rd man/mzmatch.ipeak.db.CreateLMDB.Rd man/mzmatch.ipeak.db.DBToText.Rd man/mzmatch.ipeak.filter.FilterCluster.Rd man/mzmatch.ipeak.filter.FilterOnRelationIDs.Rd man/mzmatch.ipeak.filter.NoiseFilter.Rd man/mzmatch.ipeak.filter.RSDFilter.Rd man/mzmatch.ipeak.filter.SimpleFilter.Rd man/mzmatch.ipeak.graphics.PeakMLToTIC.Rd man/mzmatch.ipeak.normalisation.Normalisation.Rd man/mzmatch.ipeak.normalisation.VanDeSompele.Rd man/mzmatch.ipeak.sort.MetAssign.Rd man/mzmatch.ipeak.sort.PeakSort.Rd man/mzmatch.ipeak.sort.RelatedPeaks.Rd man/mzmatch.ipeak.util.BreakupRelated.Rd man/mzmatch.ipeak.util.ExtractSets.Rd man/mzmatch.ipeak.util.Identify.Rd man/mzmatch.ipeak.util.Recovery.Rd
andzajan/mzmatch.R documentation built on Nov. 18, 2017, 9:57 a.m.