PeakML.Isotope.ReadDB: PeakML.Isotope.ReadDB
In andzajan/mzmatch.R: mzmatch and PeakML integration for XCMS.
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Description
Generates a R data frame containing id, name and formula from the databases specified in the vector.
Usage
1
PeakML.Isotope.ReadDB(dbNames)
Arguments
dbNames
A vector containing database names.
Details
The PeakML file format defines an open and extensible file format for storing extracted hyphenated mass spectrometry data. As such, the format will enable users to store intermediate data in a structured manner, but more importantly, to exchange data between different data analysis software. This will give complete flexible control to the users of data analysis software to cherry pick those components best suited to their needs. The PeakML.Methods contains a set of R functions that will enable end users to rapidly write scripts to manipulate PeakML files.
Value
PeakML.Isotope.ReadDB returns a data frame containing id, name and formulas in the databases specified.
Author(s)
Achuthanuni Chokkathukalam (unni.chokkathukalam@glasgow.ac.uk)
Andris Jankevics (a.jankevics@rug.nl)
References
PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis, Richard A. Scheltema, Andris Jankevics, Ritsert C. Jansen, Morris A. Swertz, Rainer Breitling, Analytical Chemistry, 2011 83 (7), 2786-2793.
See Also
andzajan/mzmatch.R documentation built on Dec. 1, 2020, 11:33 a.m.
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Description Usage Arguments Details Value Author(s) References See Also
Description
Generates a R data frame containing id, name and formula from the databases specified in the vector.
Usage
1 | PeakML.Isotope.ReadDB(dbNames)
|
Arguments
dbNames |
A vector containing database names. |
Details
The PeakML file format defines an open and extensible file format for storing extracted hyphenated mass spectrometry data. As such, the format will enable users to store intermediate data in a structured manner, but more importantly, to exchange data between different data analysis software. This will give complete flexible control to the users of data analysis software to cherry pick those components best suited to their needs. The PeakML.Methods contains a set of R functions that will enable end users to rapidly write scripts to manipulate PeakML files.
Value
PeakML.Isotope.ReadDB returns a data frame containing id, name and formulas in the databases specified.
Author(s)
Achuthanuni Chokkathukalam (unni.chokkathukalam@glasgow.ac.uk) Andris Jankevics (a.jankevics@rug.nl)
References
PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis, Richard A. Scheltema, Andris Jankevics, Ritsert C. Jansen, Morris A. Swertz, Rainer Breitling, Analytical Chemistry, 2011 83 (7), 2786-2793.
See Also
R Package Documentation
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