anilchalisey/prana: Pipeline for RNA-seq analysis using R
Version 0.0.0.9000

Pipeline for differential analysis of RNA-seq data using R. It is a complete workflow beginning with raw read files: read alignment, counting, statistical analysis using edgeR, DESEq2 or limma, gene ontology and pathway analysis using GOSeq, and promoter motif enrichment analysis with HOMER.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("anilchalisey/prana")
anilchalisey/prana documentation built on May 19, 2017, 3:55 a.m.