classify.opp.files: Classify particles for a list of OPP files.

Description Usage Arguments Value Examples

View source: R/gating.R

Description

Classify a list of OPP files. Save per file aggregate population statistics to SQLite3 database and save particle population definitions to text files in vct.dir.

Usage

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classify.opp.files(
  db,
  opp.dir,
  opp.files,
  vct.dir,
  gating.id = NULL,
  vct.table = NULL
)

Arguments

db

SQLite3 database file path.

opp.dir

OPP file directory.

opp.files

List of OPP files to classify. Include julian day directory.

vct.dir

VCT file output directory.

gating.id

Optionally provide the ID for gating parameters. If NULL, the existing gating parameters will be used.

vct.table

Optionally provide the VCT table. If NULL, the existing gating parameters will be used.

Value

None

Examples

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## Not run: 
classify.opp.files(db, opp.dir, opp.files, vct.dir)
classify.opp.files(db, opp.dir, opp.files, vct.dir,
                   "d3afb1ea-ad20-46cf-866d-869300fe17f4")

## End(Not run)

armbrustlab/popcycle documentation built on Aug. 8, 2020, 1:08 a.m.