In bgctw/twKinresp: Fitting kinetic models to microbial respiration data

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "tools/README-"
)

Overview

The twKinresp package estimating microbial growth parameters by fitting kinetic models to microbial respiration data.

• $x_0$: initial microbial biomass
• $r_0$: initial microbial activity, and
• $\mu_{max}$: maximum growth rate of microbial community

Installation

# From CRAN (in future)
#install.packages("twKinresp")

# First install dependencies
# install.packages("devtools")
install.packages(c("logitnorm","lmtest","nlme"))
# Install from github
devtools::install_github("bgctw/twKinresp")

Usage

See the kinrespExperiment vignette and other package vignettes (*.md) for examples.

bgctw/twKinresp documentation built on May 10, 2019, 2:42 p.m.