validateMarkers: Modify data to sync to markers in marker file

Description Usage Arguments Value

Description

Filter out any markers in data that are not in marker file; Add to data markers in marker file but not Print a warning with a list of any markers that are in data but not marker file OR that are in marker file but not data

Usage

1
validateMarkers(dat, m2, v = FALSE, logFile = NULL)

Arguments

dat

tibble containing marker data

m2

list of individual markers in marker file

v

verbose - when set to TRUE, messages will be printed to screen as well as to file; DEFAULT = TRUE

logFile

file to write log messages to; DEFAULT=NULL

Value

a tibble with extra markers filtered out


bic-mskcc/halo documentation built on Jan. 27, 2018, 12:19 a.m.