Man pages for biodosimetry-uab/biodosetools
Shiny App To Be Used By Biological Dosimetry Laboratories

AIC_from_dataCalculate AIC (Akaike's ‘An Information Criterion’)
biodosetools'biodosetools' package
calculate_aberrAberration calculation functions
calculate_decision_thresholdCalculate decision thresholds
calculate_genome_factorCalculate genome fraction
calculate_model_statsCalculate model statistics
calculate_trans_rate_manualCalculate manual translocation rate
calculate_trans_rate_sigurdsonCalculate Sigurdson's translocation rate
calculate_yieldCalculate yield from dose
calculate_yield_infimumCalculate theoretical yield infimum
correct_boundaryCorrect boundary of irradiated fractions to be bounded by 0...
correct_conf_intCorrect yield confidence interval
correct_negative_valsCorrect negative values
correct_yieldCorrect yields if they are below the curve
dna_content_fractions_ihgscDNA Content Fractions of Human Chromosomes (IHGSC)
dna_content_fractions_mortonDNA Content Fractions of Human Chromosomes (Morton 1991)
estimate_hetero_mixed_poissonHeterogeneous dose estimation (Mixed Poisson model)
estimate_partial_body_dolphinPartial-body dose estimation (Dolphin's method)
estimate_whole_body_deltaWhole-body dose estimation (delta method)
estimate_whole_body_merkleWhole-body dose estimation (Merkle's method)
fitPerform dose-effect fitting algorithm
fit_glm_methodPerform GLM (Generalised Linear Model) fitting
fit_maxlik_methodPerform max-likelihood optimization fitting
gardner_confidence_tableGardner's Confidence Intervals Table
include_helpInclude Markdown help
load_rmd_reportLoad RMarkdown report
pipePipe operator
plot_estimated_dose_curvePlot dose estimation curve
plot_fit_dose_curvePlot fit dose curve
prepare_maxlik_count_dataPrepare count data for max-likelihood optimization fitting
project_yieldProject yield into dose-effect fitting curve
protracted_g_functionCalculate protracted function G(x)
R_factorCalculate R regression confidence factor
run_appRun the Shiny Application
yield_error_funCalculate yield error
yield_funCalculate yield
biodosimetry-uab/biodosetools documentation built on Nov. 25, 2021, 1:14 p.m.