Files in bioimaginggroup/bioimagetools

Tools for Microscopy Imaging

.Rbuildignore

.gitattributes

.gitignore

CRAN-SUBMISSION

DESCRIPTION

LICENSE

NAMESPACE

NEWS

R/Kcross3D.R R/Kcross3denvelope.R R/L3cross3d.R R/Lcross3denvelope.R R/bwlabel3d.R R/cNNTest.R R/cmoments3d.R R/computedistances.R R/crossNN.R R/distance2border.R R/filterImage3d.R R/findedges.R R/findmaxline.R R/folder_choose.R R/image.R R/intensity3d.R R/isinstalled.R R/isline.R R/mexican_hat_brush.R R/nearestclassdistances.R R/nearestclassdistances_c.R R/nearestneighbourdistribution.R R/nearestneighbourenvelope.R R/nearestneighbours.R R/onattach.R R/outside.R R/pcf3d.R R/pcfcross3d.R R/pcfcross3denvelope.R R/plot_nearest_class_distances.R R/point2class.R R/readClassTIF.R R/readbmp.R R/readtif.R R/segment.R R/segmentoutside.R R/spots.R R/standardize.R R/status.R R/tablen.R R/testColoc.R R/writetif.R README.md

TODO

_pkgdown.yaml

cran-comments.md

docs/404.html

docs/LICENSE

docs/LICENSE-text.html

docs/LICENSE.html

docs/articles/bioimagetools.html

docs/articles/bioimagetools_files/figure-html/img-1.png

docs/articles/bioimagetools_files/figure-html/img-2.png

docs/articles/bioimagetools_files/figure-html/img-3.png

docs/articles/bioimagetools_files/figure-html/readMBP-1.png

docs/articles/bioimagetools_files/figure-html/readclasstif-1.png

docs/articles/bioimagetools_files/figure-html/readtif-1.png

docs/articles/index.html

docs/articles/largevignettes/readwriteplot.html

docs/articles/largevignettes/readwriteplot_files/figure-html/img-1.png

docs/articles/largevignettes/readwriteplot_files/figure-html/img-2.png

docs/articles/largevignettes/readwriteplot_files/figure-html/img-3.png

docs/articles/largevignettes/readwriteplot_files/figure-html/readMBP-1.png

docs/articles/largevignettes/readwriteplot_files/figure-html/readclasstif-1.png

docs/articles/largevignettes/readwriteplot_files/figure-html/readtif-1.png

docs/articles/largevignettes/readwriteplot_files/figure-html/singleslicedim-1.png

docs/articles/readwriteplot.html

docs/articles/readwriteplot_files/figure-html/img-1.png

docs/articles/readwriteplot_files/figure-html/img-2.png

docs/articles/readwriteplot_files/figure-html/img-3.png

docs/articles/readwriteplot_files/figure-html/readMBP-1.png

docs/articles/readwriteplot_files/figure-html/readclasstif-1.png

docs/articles/readwriteplot_files/figure-html/readtif-1.png

docs/articles/readwriteplot_files/figure-html/singleslicedim-1.png

docs/articles/readwriteplot_files/header-attrs-2.8/header-attrs.js

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/K.cross.3D.html

docs/reference/L.cross.3D.html

docs/reference/Rplot001.png

docs/reference/bwlabel3d.html

docs/reference/cmoments3d.html

docs/reference/cnnTest.html

docs/reference/crossNN.html

docs/reference/distance2border-11.png

docs/reference/distance2border-18.png

docs/reference/distance2border-2.png

docs/reference/distance2border-24.png

docs/reference/distance2border-27.png

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docs/reference/distance2border-4.png

docs/reference/distance2border-6.png

docs/reference/distance2border-8.png

docs/reference/distance2border.html

docs/reference/filterImage3d.html

docs/reference/folder.choose.html

docs/reference/img.html

docs/reference/index.html

docs/reference/intensity3D.html

docs/reference/mexican.hat.brush.html

docs/reference/nearest.neighbour.distribution-1.png

docs/reference/nearest.neighbour.distribution-2.png

docs/reference/nearest.neighbour.distribution.html

docs/reference/nearestClassDistance.html

docs/reference/nearestClassDistance3.html

docs/reference/nearestClassDistances.html

docs/reference/nearestClassDistances2.html

docs/reference/nearestClassDistances3.html

docs/reference/outside.html

docs/reference/plotNearestClassDistances.html

docs/reference/readBMP-1.png

docs/reference/readBMP-2.png

docs/reference/readBMP.html

docs/reference/readClassTIF.html

docs/reference/readTIF-1.png

docs/reference/readTIF-2.png

docs/reference/readTIF.html

docs/reference/segment-10.png

docs/reference/segment.html

docs/reference/segment.outside-1.png

docs/reference/segment.outside-4.png

docs/reference/segment.outside.html

docs/reference/segmentoutside.html

docs/reference/spots.html

docs/reference/standardize-1.png

docs/reference/standardize-2.png

docs/reference/standardize.html

docs/reference/table.n.html

docs/reference/testColoc.html

docs/reference/writeTIF.html

docs/sitemap.xml

inst/extdata/V.bmp

inst/extdata/amask.tif

inst/extdata/cell.csv

inst/extdata/kreispunkte.table

inst/extdata/kringel.tif

man/K.cross.3D.Rd man/L.cross.3D.Rd man/bwlabel3d.Rd man/cmoments3d.Rd man/cnnTest.Rd man/crossNN.Rd man/distance2border.Rd man/filterImage3d.Rd man/folder.choose.Rd man/img.Rd man/intensity3D.Rd man/mexican.hat.brush.Rd man/nearest.neighbour.distribution.Rd man/nearestClassDistance.Rd man/nearestClassDistances.Rd man/outside.Rd man/plotNearestClassDistances.Rd man/readBMP.Rd man/readClassTIF.Rd man/readTIF.Rd man/segment.Rd man/segment.outside.Rd man/spots.Rd man/standardize.Rd man/table.n.Rd man/testColoc.Rd man/writeTIF.Rd no_cran/R/diameter.R no_cran/image_lattice.R no_cran/ncd-test.Rmd

no_cran/ncd-test.html

no_cran/nearestclassdistances2.R no_cran/test/spatialstatistics.R

src/.gitignore

src/Makevars.win

src/bioimagetools.h

src/filter.c

src/getid.c

src/init.c

src/nearestClassDistances.c

src/segment.c

vignettes/.gitignore

vignettes/largevignettes/readwriteplot.Rmd

vignettes/largevignettes/readwriteplot.html

vignettes/largevignettes/readwriteplot.md vignettes/largevignettes/render.R

vignettes/readwriteplot.html

vignettes/readwriteplot.html.asis

bioimaginggroup/bioimagetools documentation built on June 2, 2022, 3:49 p.m.