In c5sire/brapix: Additional Convenience Tools to Tnteract with BrAPI Compatible Databases

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brapix

The goal of brapix is to provide eXtra tools for convenient bulk download breeding data and also do quick summaries and quality checks.

Installation

You can install brapix from github with:

# install.packages("devtools")

devtools::install_github("c5sire/brapix")

Example

This is a basic example which shows you how to solve a common problem:

library(brapi)
library(brapix)
library(magrittr)


con <- ba_db()$germinate_test

loc <- ba_locations(con, pageSize = 10000)

ba_describe(loc)

gmp <- ba_genomemaps(con = con)

gmp

ba_genomemaps_details(con, mapDbId = "1") %>% ba_chart()

c5sire/brapix documentation built on May 28, 2019, 4:35 p.m.