In cdanmaigona/GenSeq: Translates DNA or RNA to amino acids
An easy package for translating DNA and RNA sequences to amino acids. It does not support ambuiguity codes. It only works with sequences that are from the nuclear genome of eukaryotes.
Installation
The R package can be installed directly from GitHub using the following codes. The devtools installation step can be skipped if you already have it installed
install.packages("devtools")
library(devtools)
install_github('cdanmaigona/Genseq', build_vignettes = T)
Example code
#create a DNA sequence
library(GenSeq)
data <- "ATGtacacagctaaaGAacggauuuctacacatGAAGgtagagaggccacagagagcacguag"
# translate the DNA sequence to IUPAC amino acid
Genseq(data)
cdanmaigona/GenSeq documentation built on Nov. 12, 2019, 12:03 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
An easy package for translating DNA and RNA sequences to amino acids. It does not support ambuiguity codes. It only works with sequences that are from the nuclear genome of eukaryotes.
Installation
The R package can be installed directly from GitHub using the following codes. The devtools installation step can be skipped if you already have it installed
install.packages("devtools") library(devtools) install_github('cdanmaigona/Genseq', build_vignettes = T)
Example code
#create a DNA sequence library(GenSeq) data <- "ATGtacacagctaaaGAacggauuuctacacatGAAGgtagagaggccacagagagcacguag" # translate the DNA sequence to IUPAC amino acid Genseq(data)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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