ckenaley/fishr: Automated Kinematic Analysis of Video Data

fish converts video files to binary images and simply analyzes the shape of a region of interest (ROI). It was developed to automate kinematic analysis of undulatory locomotion using highly contrasted video data produced from backlighting an animal. fish converts a video to binary images and then to matrices to determine a column-wise midpoint of ROI pixels is determined. tThis, in turn, determines the midline coordinates and from these data one can calculate important kinematic parameters including amplitude, frequency, wavelength, etc.

Getting started

Package details

Maintainer
LicenseGPL (>= 2)
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ckenaley/fishr")
ckenaley/fishr documentation built on Feb. 1, 2018, 12:55 a.m.