write.biom: Write counts, metadata, taxonomy, and phylogeny to a biom...

Description Usage Arguments Value

View source: R/write.biom.r

Description

Write counts, metadata, taxonomy, and phylogeny to a biom file.

Usage

1
write.biom(biom, file, format = "hdf5")

Arguments

biom

The BIOM object to save to the file.

file

Path to the output file.

format

Options are “tab”, “json”, and “hdfs”, corresponding to classic tabular format, biom format version 1.0 and biom version 2.1, respectively. Abbreviations are also accepted. See http://biom-format.org/documentation/ for details.

Value

On success, returns NULL invisibly.


cmmr/rbiom documentation built on Nov. 21, 2018, 10:04 a.m.