Files in cobriniklab/cataRact
Functions for single cell work in the Cobrinik lab at CHLA

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DESCRIPTION
LICENSE
NAMESPACE
R/SCNA_peak_genes.R R/hello.R R/load_waterfall_dat.R R/scde_input.R
cataract.Rproj
data/coldata_sample.rda
data/comparison_groups_sample.rda
data/expr_matrix_sample.rda
diffex_by_gene/gene_treatment_sh733_sh737_diffex.rds
diffex_by_gene/gene_treatment_sh733_shCtrl_diffex.rds
diffex_by_gene/gene_treatment_sh737_shCtrl_diffex.rds
diffex_by_gene/treatment_gene_stringtie.rds
diffex_by_gene/treatment_sh733_vs_sh737_stringtie_gene_expression_values.csv
diffex_by_gene/treatment_sh733_vs_shCtrl_stringtie_gene_expression_values.csv
diffex_by_gene/treatment_sh737_vs_shCtrl_stringtie_gene_expression_values.csv
diffex_by_trs/treatment_trs_stringtie.rds
inst/extdata/coldata_sample.csv
inst/extdata/comparison_groups_sample.csv
inst/extdata/expression_matrix_sample.csv
man/RbindSegPlot.Rd man/SingleSegPlot.Rd man/clean_gene_ediff.Rd man/clean_trs_ediff.Rd man/color_by_gene_expr.Rd man/color_by_var.Rd man/getGene.Rd man/hello.Rd man/karyo_obj-class.Rd man/load_dense_seg_dat.Rd man/load_scattered_seg_dat.Rd man/lookup_genes.Rd man/meetsCondition.Rd man/parallel_scde.Rd man/plot_all_to_file.Rd man/plot_base_seg.Rd man/plot_chrom_to_file.Rd man/prep_for_karyoplot.Rd man/prep_scde_input.Rd man/quantify_marker_expr.Rd man/quantify_mito.Rd man/query_biomart_genes.Rd man/query_biomart_transcripts.Rd man/refseq_from_trsid.Rd man/run_gene_scde.Rd man/run_trs_scde.Rd man/sort_T_b4_CL.Rd man/subset_jt.Rd man/tidy_lookup_genes.Rd
test.csv
tests/testthat.R
cobriniklab/cataRact documentation built on Jan. 9, 2018, 7:06 a.m.