Files in colemonnahan/rnuts
No-U-Turn MCMC Sampling for 'ADMB' Models
.Rbuildignore
.github/workflows/R-CMD-check.yml
.github/workflows/calc-coverage.yml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/adnuts.R
R/pairs_admb.R
R/parallel.R
R/sample_admb.R
R/sample_tmb_deprecated.R
R/samplers.R
R/utils.R
README.md
adnuts.Rproj
cran-comments.md
inst/CITATION
inst/demo.R
inst/examples/fit.RDS
inst/examples/simple/simple.dat
inst/examples/simple/simple.tpl
man/adfit.Rd
man/adnuts.Rd
man/as.data.frame.adfit.Rd
man/check_identifiable.Rd
man/dot-check_ADMB_version.Rd
man/dot-check_console_printing.Rd
man/dot-check_model_path.Rd
man/dot-getADMBHessian.Rd
man/dot-sample_admb.Rd
man/dot-update_model.Rd
man/extract_sampler_params.Rd
man/extract_samples.Rd
man/is.adfit.Rd
man/launch_shinyadmb.Rd
man/launch_shinytmb.Rd
man/pairs_admb.Rd
man/plot.adfit.Rd
man/plot_marginals.Rd
man/plot_sampler_params.Rd
man/plot_uncertainties.Rd
man/print.adfit.Rd
man/sample_admb.Rd
man/sample_inits.Rd
man/sample_tmb.Rd
man/sample_tmb_hmc.Rd
man/sample_tmb_nuts.Rd
man/sample_tmb_rwm.Rd
man/summary.adfit.Rd
man/wrappers.Rd
tests/simple/simple.dat
tests/simple/simple.tpl
tests/testthat.R
tests/testthat/_expect_monitor
tests/testthat/_expect_nuts
tests/testthat/_expect_nuts_mle
tests/testthat/_expect_simple_rwm
tests/testthat/_expect_sp
tests/testthat/fit.RDS
tests/testthat/setup.R
tests/testthat/test-class-methods.R
tests/testthat/test-consistency.R
tests/testthat/test-diagnostics.R
tests/testthat/test-reproducibility.R
tests/testthat/test-sample_admb.R
vignettes/adnuts.Rmd
vignettes/auto/refs.el
vignettes/fit.RDS
vignettes/metric_adaptation.png
vignettes/refs.bib
vignettes/tree_trajectories.png
vignettes/validity_tests.png
