Some tools bult using the struct package

ANOVA-class | ANOVA |

autoscale-class | Autoscale |

balanced_accuracy-class | Balanced Accuracy |

blank_filter-class | Blank filter |

blank_filter.hist-class | plot for blank filter |

calculate | Calculate metric |

chart.plot | chart.plot |

classical_lsq-class | Classical Least Squares regression |

compare_dist-class | Compare distributions |

confounders_clsq-class | Check for confounding factors in ttest |

confounders_lsq.barchart-class | barchart of percent change |

confounders_lsq.boxplot-class | boxplot of percent change |

corr_coef-class | correlation model class |

dataset.boxplot-class | Dataset boxplot |

dataset.dist-class | Distribution plot |

dataset.factor_barchart-class | dataset.factor_barchart class |

dataset.heatmap-class | dataset.heatmap class |

dratio_filter-class | D ratio filter |

feature_boxplot-class | feature_boxplot class |

feature_profile-class | feature_profile class |

filter_by_name-class | filter by name |

filter_na_count-class | filter_na_count class |

filter_smeta-class | filter_smeta class |

fisher_exact-class | fisher_exact class |

fold_change-class | fold change class |

fold_change_int-class | fold change for interactions class |

fold_change_plot-class | fold_change plot |

forward_selection_byrank-class | forward selection by rank |

fs_line-class | forward_selection_plot |

glog_transform-class | glog transform |

grid_search_1d-class | grid_search_1d class |

gs_line-class | grid_search_plot |

HCA-class | HCA method class |

hca_dendrogram-class | hca_dendrogram class |

HSD-class | HSD model class |

HSDEM-class | HSD model class using estimated marginal means |

kfoldxcv_grid-class | kfoldxcv_grid class |

kfoldxcv_metric-class | kfoldxcv_metric class |

kfold_xval-class | kfold_xval model class |

knn_impute-class | knn missing value imputation |

kw_p_hist-class | plot histogram of p values |

kw_rank_sum-class | kruskal-wallis model class |

linear_model-class | linear model class |

log_transform-class | log transform |

mean_centre-class | mean_centre model class |

method.apply | Apply method |

mixed_effect-class | Mixed Effects model class |

model.predict | Model prediction |

model.reverse | Reverse preprocessing |

model.train | Train a model |

mv_boxplot-class | mv_boxplot class |

mv_feature_filter-class | filter features by fraction missing values |

mv_feature_filter.hist-class | plot for missing value sample filter |

mv_histogram-class | mv_histogram class |

mv_sample_filter-class | missing value filter (samples) |

mv_sample_filter.hist-class | plot for missing value sample filter |

pairs_filter-class | Pairs filter |

pca_biplot_plot-class | pca_biplot_plot class |

PCA-class | PCA model class |

pca_correlation_plot-class | pca_correlation_plot class |

PCA.dstat-class | pca_dstat_plot class |

pca_loadings_plot-class | pca_loadings_plot class |

pca_scores_plot-class | pca_scores_plot class |

PCA.scree-class | pca_scree_plot class |

permutation_test.boxplot-class | permutation_test.boxplot class |

permutation_test-class | permutation test class |

permutation_test.hist-class | permutation_test.hist class |

permutation_test.scatter-class | permutation_test.scatter class |

permutation_test.violin-class | permutation_test.violin class |

permute_sample_order-class | permute_sample_order class |

PLSDA-class | PLSDA model class |

plsda_scores_plot-class | plsda_scores_plot class |

PLSFC-class | PLS fold change |

PLSR-class | PLSR model class |

plsr_cook_dist-class | plsr_residual_plot class |

plsr_prediction_plot-class | plsr_prediction_plot class |

plsr_qq_plot-class | plsr_qq_plot class |

plsr_residual_hist-class | plsr_residual_hist class |

pqn_norm-class | PQN nromalisation |

pqn_norm.hist-class | plot for PQN normalisation |

prop_na-class | prop_na model class |

rsd_filter-class | rsd filter |

rsd_filter.hist-class | plot for rsd filter |

r_squared-class | Coefficient of determination class |

run | Runs an iterator, applying the chosen model multiple times. |

sbcms_dataset | Data from sbcms |

sb_corr-class | sbcms |

split_data-class | split data into sets |

structToolbox | structToolbox: Examples of tools built using the Statistics... |

tSNE-class | tSNE method class |

tSNE_scatter-class | tSNE_scatter class |

ttest-class | t-test model class |

vec_norm-class | vector nromalisation |

wilcox_p_hist-class | plot histogram of p values |

wilcox_test-class | wilcoxon signed rank test method class |

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